# Makefile.in generated by automake 1.11.1 from Makefile.am.
# src/Makefile.  Generated from Makefile.in by configure.

# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
# 2003, 2004, 2005, 2006, 2007, 2008, 2009  Free Software Foundation,
# Inc.
# This Makefile.in is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.

# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY, to the extent permitted by law; without
# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
# PARTICULAR PURPOSE.



#   FreeContact - program to predict protein residue contacts from a sufficiently large multiple alignment
#   Copyright (C) 2012-2013  Laszlo Kajan <lkajan@rostlab.org> Rost Lab, Technical University of Munich, Germany
#   
#   This program is free software: you can redistribute it and/or modify
#   it under the terms of the GNU General Public License as published by
#   the Free Software Foundation, either version 3 of the License, or
#   (at your option) any later version.
#   
#   This program is distributed in the hope that it will be useful,
#   but WITHOUT ANY WARRANTY; without even the implied warranty of
#   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
#   GNU General Public License for more details.
#   
#   You should have received a copy of the GNU General Public License
#   along with this program.  If not, see <http://www.gnu.org/licenses/>.

# BIOXSD comes from configure.ac because of an apparent bug in depfile commands, see configure.ac




pkgdatadir = $(datadir)/freecontact
pkgincludedir = $(includedir)/freecontact
pkglibdir = $(libdir)/freecontact
pkglibexecdir = $(libexecdir)/freecontact
am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
install_sh_DATA = $(install_sh) -c -m 644
install_sh_PROGRAM = $(install_sh) -c
install_sh_SCRIPT = $(install_sh) -c
INSTALL_HEADER = $(INSTALL_DATA)
transform = $(program_transform_name)
NORMAL_INSTALL = :
PRE_INSTALL = :
POST_INSTALL = :
NORMAL_UNINSTALL = :
PRE_UNINSTALL = :
POST_UNINSTALL = :
build_triplet = x86_64-unknown-linux-gnu
host_triplet = x86_64-unknown-linux-gnu
bin_PROGRAMS = freecontact$(EXEEXT)
subdir = src
DIST_COMMON = $(dist_check_SCRIPTS) $(dist_examples_DATA) \
	$(dist_pkgdata_DATA) $(dist_pkgdata_SCRIPTS) \
	$(srcdir)/Makefile.am $(srcdir)/Makefile.in
ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
am__aclocal_m4_deps = $(top_srcdir)/m4/ax_blas.m4 \
	$(top_srcdir)/m4/ax_boost_base.m4 \
	$(top_srcdir)/m4/ax_boost_program_options.m4 \
	$(top_srcdir)/m4/ax_check_compile_flag.m4 \
	$(top_srcdir)/m4/ax_ext.m4 \
	$(top_srcdir)/m4/ax_gcc_x86_cpuid.m4 \
	$(top_srcdir)/m4/ax_lapack.m4 \
	$(top_srcdir)/m4/ax_lib_xerces.m4 \
	$(top_srcdir)/m4/ax_openmp.m4 \
	$(top_srcdir)/m4/ax_prog_doxygen.m4 \
	$(top_srcdir)/m4/ax_pthread.m4 $(top_srcdir)/m4/ax_xsdcxx.m4 \
	$(top_srcdir)/m4/libtool.m4 $(top_srcdir)/m4/ltoptions.m4 \
	$(top_srcdir)/m4/ltsugar.m4 $(top_srcdir)/m4/ltversion.m4 \
	$(top_srcdir)/m4/lt~obsolete.m4 $(top_srcdir)/configure.ac
am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
	$(ACLOCAL_M4)
mkinstalldirs = $(install_sh) -d
CONFIG_HEADER = $(top_builddir)/lib/config.h
CONFIG_CLEAN_FILES =
CONFIG_CLEAN_VPATH_FILES =
am__installdirs = "$(DESTDIR)$(bindir)" "$(DESTDIR)$(pkgdatadir)" \
	"$(DESTDIR)$(man1dir)" "$(DESTDIR)$(examplesdir)" \
	"$(DESTDIR)$(pkgdatadir)"
PROGRAMS = $(bin_PROGRAMS)
am__freecontact_SOURCES_DIST = $(top_srcdir)/lib/config.h \
	freecontact.cpp fc.h $(top_srcdir)/lib/freecontact.h \
	_write_bioxsd.cpp
#am__objects_1 = freecontact-_write_bioxsd.$(OBJEXT)
am_freecontact_OBJECTS = freecontact-freecontact.$(OBJEXT) \
	$(am__objects_1)
#am__objects_2 =  \
#	freecontact-freecontact_input_xsd.$(OBJEXT) \
#	freecontact-freecontact_output_xsd.$(OBJEXT) \
#	freecontact-$(BIOXSD)_xsd.$(OBJEXT)
nodist_freecontact_OBJECTS = $(am__objects_2)
freecontact_OBJECTS = $(am_freecontact_OBJECTS) \
	$(nodist_freecontact_OBJECTS)
am__DEPENDENCIES_1 =
freecontact_DEPENDENCIES = $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1) \
	$(top_builddir)/lib/libfreecontact.la
freecontact_LINK = $(LIBTOOL) --tag=CXX $(AM_LIBTOOLFLAGS) \
	$(LIBTOOLFLAGS) --mode=link $(CXXLD) $(AM_CXXFLAGS) \
	$(CXXFLAGS) $(freecontact_LDFLAGS) $(LDFLAGS) -o $@
am__vpath_adj_setup = srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`;
am__vpath_adj = case $$p in \
    $(srcdir)/*) f=`echo "$$p" | sed "s|^$$srcdirstrip/||"`;; \
    *) f=$$p;; \
  esac;
am__strip_dir = f=`echo $$p | sed -e 's|^.*/||'`;
am__install_max = 40
am__nobase_strip_setup = \
  srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*|]/\\\\&/g'`
am__nobase_strip = \
  for p in $$list; do echo "$$p"; done | sed -e "s|$$srcdirstrip/||"
am__nobase_list = $(am__nobase_strip_setup); \
  for p in $$list; do echo "$$p $$p"; done | \
  sed "s| $$srcdirstrip/| |;"' / .*\//!s/ .*/ ./; s,\( .*\)/[^/]*$$,\1,' | \
  $(AWK) 'BEGIN { files["."] = "" } { files[$$2] = files[$$2] " " $$1; \
    if (++n[$$2] == $(am__install_max)) \
      { print $$2, files[$$2]; n[$$2] = 0; files[$$2] = "" } } \
    END { for (dir in files) print dir, files[dir] }'
am__base_list = \
  sed '$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;s/\n/ /g' | \
  sed '$$!N;$$!N;$$!N;$$!N;s/\n/ /g'
SCRIPTS = $(dist_pkgdata_SCRIPTS)
DEFAULT_INCLUDES = -I. -I$(top_builddir)/lib
depcomp = $(SHELL) $(top_srcdir)/depcomp
am__depfiles_maybe = depfiles
am__mv = mv -f
CXXCOMPILE = $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) \
	$(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS)
LTCXXCOMPILE = $(LIBTOOL) --tag=CXX $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \
	--mode=compile $(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) \
	$(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS)
CXXLD = $(CXX)
CXXLINK = $(LIBTOOL) --tag=CXX $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \
	--mode=link $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) $(AM_LDFLAGS) \
	$(LDFLAGS) -o $@
COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
LTCOMPILE = $(LIBTOOL) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \
	--mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) \
	$(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
CCLD = $(CC)
LINK = $(LIBTOOL) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \
	--mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) $(AM_LDFLAGS) \
	$(LDFLAGS) -o $@
SOURCES = $(freecontact_SOURCES) $(nodist_freecontact_SOURCES)
DIST_SOURCES = $(am__freecontact_SOURCES_DIST)
man1dir = $(mandir)/man1
NROFF = nroff
MANS = $(man_MANS)
DATA = $(dist_examples_DATA) $(dist_pkgdata_DATA)
ETAGS = etags
CTAGS = ctags
am__tty_colors = \
red=; grn=; lgn=; blu=; std=
DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
ACLOCAL = ${SHELL} /home/casp14/DeepRank_db_tools/tools/DNCON2/freecontact-1.0.21/missing --run aclocal-1.11
AMTAR = ${SHELL} /home/casp14/DeepRank_db_tools/tools/DNCON2/freecontact-1.0.21/missing --run tar
AR = ar
AUTOCONF = ${SHELL} /home/casp14/DeepRank_db_tools/tools/DNCON2/freecontact-1.0.21/missing --run autoconf
AUTOHEADER = ${SHELL} /home/casp14/DeepRank_db_tools/tools/DNCON2/freecontact-1.0.21/missing --run autoheader
AUTOMAKE = ${SHELL} /home/casp14/DeepRank_db_tools/tools/DNCON2/freecontact-1.0.21/missing --run automake-1.11
AWK = gawk
BIOXSD = BioXSD-1.1
BLAS_LIBS = -lopenblas
BOOST_CPPFLAGS = -I/home/casp14/DeepRank_db_tools//tools/boost_1_38_0//include
BOOST_LDFLAGS = -L/home/casp14/DeepRank_db_tools//tools/boost_1_38_0//lib
BOOST_PROGRAM_OPTIONS_LIB = -lboost_program_options-gcc44-mt-1_38
CC = gcc
CCDEPMODE = depmode=gcc3
CFLAGS = -I/home/casp14/DeepRank_db_tools//tools/OpenBLAS/include -I/home/casp14/DeepRank_db_tools//tools/boost_1_38_0/include/boost-1_38
CPP = gcc -E
CPPFLAGS = -I/home/casp14/DeepRank_db_tools//tools/OpenBLAS/include -I/home/casp14/DeepRank_db_tools//tools/boost_1_38_0/include/boost-1_38
CXX = g++
CXXCPP = g++ -E
CXXDEPMODE = depmode=gcc3
CXXFLAGS = -g -O2
CYGPATH_W = echo
DEFS = -DHAVE_CONFIG_H
DEPDIR = .deps
DLLTOOL = false
DOXYGEN_PAPER_SIZE = 
DSYMUTIL = 
DUMPBIN = 
DX_CONFIG = Doxyfile
DX_DOCDIR = ../doxygen-doc
DX_DOT = 
DX_DOXYGEN = /usr/bin/doxygen
DX_DVIPS = 
DX_EGREP = 
DX_ENV =  SRCDIR='.' PROJECT='libfreecontact' DOCDIR='../doxygen-doc' VERSION='1.0.21' PERL_PATH='/usr/bin/perl' HAVE_DOT='NO' GENERATE_MAN='NO' GENERATE_RTF='NO' GENERATE_XML='NO' GENERATE_HTMLHELP='NO' GENERATE_CHI='NO' GENERATE_HTML='YES' GENERATE_LATEX='NO'
DX_FLAG_chi = 0
DX_FLAG_chm = 0
DX_FLAG_doc = 1
DX_FLAG_dot = 0
DX_FLAG_html = 1
DX_FLAG_man = 0
DX_FLAG_pdf = 0
DX_FLAG_ps = 0
DX_FLAG_rtf = 0
DX_FLAG_xml = 0
DX_HHC = 
DX_LATEX = 
DX_MAKEINDEX = 
DX_PDFLATEX = 
DX_PERL = /usr/bin/perl
DX_PROJECT = libfreecontact
ECHO_C = 
ECHO_N = -n
ECHO_T = 
EGREP = /bin/grep -E
EXEEXT = 
F77 = gfortran
FC = gfortran
FCFLAGS = -g -O2
FCLIBS =  -L/home/casp14/DeepRank_db_tools//tools/OpenBLAS/lib -L/home/casp14/DeepRank_db_tools//tools/boost_1_38_0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../.. -lgfortranbegin -lgfortran -lm
FFLAGS = -g -O2
FGREP = /bin/grep -F
FLIBS =  -L/home/casp14/DeepRank_db_tools//tools/OpenBLAS/lib -L/home/casp14/DeepRank_db_tools//tools/boost_1_38_0/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../.. -lgfortranbegin -lgfortran -lm
GREP = /bin/grep
INSTALL = /usr/bin/install -c
INSTALL_DATA = ${INSTALL} -m 644
INSTALL_PROGRAM = ${INSTALL}
INSTALL_SCRIPT = ${INSTALL}
INSTALL_STRIP_PROGRAM = $(install_sh) -c -s
LAPACK_LIBS = 
LD = /usr/bin/ld -m elf_x86_64
LDFLAGS = -L/home/casp14/DeepRank_db_tools//tools/OpenBLAS/lib -L/home/casp14/DeepRank_db_tools//tools/boost_1_38_0/lib
LIBOBJS = 
LIBS = 
LIBTOOL = $(SHELL) $(top_builddir)/libtool
LIPO = 
LN_S = ln -s
LTLIBOBJS = 
LT_SYS_LIBRARY_PATH = 
MAKEINFO = ${SHELL} /home/casp14/DeepRank_db_tools/tools/DNCON2/freecontact-1.0.21/missing --run makeinfo
MANIFEST_TOOL = :
MKDIR_P = /bin/mkdir -p
NM = /usr/bin/nm -B
NMEDIT = 
O3FLAGS = 
OBJDUMP = objdump
OBJEXT = o
OPENMP_CFLAGS = 
OPENMP_CXXFLAGS = -fopenmp
OPENMP_FCFLAGS = 
OPENMP_FFLAGS = 
OTOOL = 
OTOOL64 = 
PACKAGE = freecontact
PACKAGE_BUGREPORT = lkajan@rostlab.org
PACKAGE_NAME = freecontact
PACKAGE_STRING = freecontact 1.0.21
PACKAGE_TARNAME = freecontact
PACKAGE_VERSION = 1.0.21
PATH_SEPARATOR = :
PTHREAD_CC = 
PTHREAD_CFLAGS = -pthread
PTHREAD_LIBS = 
RANLIB = ranlib
SED = /bin/sed
SET_MAKE = 
SHELL = /bin/sh
SIMD_FLAGS =  -mmmx -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -mavx
STRIP = strip
VERSION = 1.0.21
XERCES_CPPFLAGS = 
XERCES_LDFLAGS = 
XERCES_LIBS = 
XERCES_VERSION = 
XSDCXX = 
XSDCXX_CPPFLAGS = 
abs_builddir = /home/casp14/DeepRank_db_tools/tools/DNCON2/freecontact-1.0.21/src
abs_srcdir = /home/casp14/DeepRank_db_tools/tools/DNCON2/freecontact-1.0.21/src
abs_top_builddir = /home/casp14/DeepRank_db_tools/tools/DNCON2/freecontact-1.0.21
abs_top_srcdir = /home/casp14/DeepRank_db_tools/tools/DNCON2/freecontact-1.0.21
ac_ct_AR = ar
ac_ct_CC = gcc
ac_ct_CXX = g++
ac_ct_DUMPBIN = 
ac_ct_F77 = gfortran
ac_ct_FC = gfortran
am__include = include
am__leading_dot = .
am__quote = 
am__tar = ${AMTAR} chof - "$$tardir"
am__untar = ${AMTAR} xf -
ax_pthread_config = 
bindir = ${exec_prefix}/bin
build = x86_64-unknown-linux-gnu
build_alias = 
build_cpu = x86_64
build_os = linux-gnu
build_vendor = unknown
builddir = .
datadir = ${datarootdir}
datarootdir = ${prefix}/share
docdir = ${datarootdir}/doc/${PACKAGE_TARNAME}
dvidir = ${docdir}
exec_prefix = ${prefix}
host = x86_64-unknown-linux-gnu
host_alias = 
host_cpu = x86_64
host_os = linux-gnu
host_vendor = unknown
htmldir = ${docdir}
includedir = ${prefix}/include
infodir = ${datarootdir}/info
install_sh = ${SHELL} /home/casp14/DeepRank_db_tools/tools/DNCON2/freecontact-1.0.21/install-sh
libdir = ${exec_prefix}/lib
libexecdir = ${exec_prefix}/libexec
localedir = ${datarootdir}/locale
localstatedir = ${prefix}/var
mandir = ${datarootdir}/man
mkdir_p = /bin/mkdir -p
oldincludedir = /usr/include
pdfdir = ${docdir}
prefix = /home/casp14/DeepRank_db_tools//tools/DNCON2/freecontact-1.0.21
program_transform_name = s,x,x,
psdir = ${docdir}
sbindir = ${exec_prefix}/sbin
sharedstatedir = ${prefix}/com
srcdir = .
sysconfdir = ${prefix}/etc
target_alias = 
top_build_prefix = ../
top_builddir = ..
top_srcdir = ..
#XSDSOURCES = freecontact_input_xsd.cxx freecontact_input_xsd.hxx freecontact_output_xsd.cxx freecontact_output_xsd.hxx $(BIOXSD)_xsd.cxx $(BIOXSD)_xsd.hxx
#XMLSOURCES = _write_bioxsd.cpp
man_MANS = freecontact.1
TESTS = test_freecontact
dist_check_SCRIPTS = test_freecontact
examplesdir = $(docdir)/examples
dist_examples_DATA = demo_1000.aln demo_1000.psicov.50 PF00071_v25_999.fa PF00071_v25_999.xml PF00071_v25_999.evfold.50 PF00071_v25_999.evfold.50.xml
dist_pkgdata_SCRIPTS = a2m2aln
# lkajan: I am not sure where to install these, perhaps [1]? That is not policy, though.
# [1] http://debian-xml-sgml.alioth.debian.org/xml-policy/xml-infrastructure-dirs.html
dist_pkgdata_DATA = $(BIOXSD).xsd freecontact_input.xsd freecontact_output.xsd
AM_CPPFLAGS = $(BOOST_CPPFLAGS) -I$(top_srcdir)/lib -D__sysconfdir__=\"$(sysconfdir)\" -D__pkgdatadir__=\"$(pkgdatadir)\" -Wall
AM_CXXFLAGS = $(OPENMP_CXXFLAGS)
AM_LDFLAGS = $(OPENMP_CXXFLAGS) $(BOOST_LDFLAGS) -Wall
freecontact_SOURCES = $(top_srcdir)/lib/config.h freecontact.cpp fc.h $(top_srcdir)/lib/freecontact.h $(XMLSOURCES)
nodist_freecontact_SOURCES = $(XSDSOURCES)
# lkajan: _xsd.[ch]xx gets built into $(top_builddir)/src
freecontact_CPPFLAGS = -I$(top_srcdir)/lib -I$(top_builddir)/src $(XERCES_CPPFLAGS) $(XSDCXX_CPPFLAGS)
freecontact_LDFLAGS = $(XERCES_LDFLAGS)
freecontact_LDADD = $(BOOST_PROGRAM_OPTIONS_LIB) $(XERCES_LIBS) $(top_builddir)/lib/libfreecontact.la

# statically linked version
STATIC_LAPACK_LIBDIR = /usr/lib/atlas-base
all: all-am

.SUFFIXES:
.SUFFIXES: .cpp .cxx .lo .o .obj
$(srcdir)/Makefile.in:  $(srcdir)/Makefile.am  $(am__configure_deps)
	@for dep in $?; do \
	  case '$(am__configure_deps)' in \
	    *$$dep*) \
	      ( cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh ) \
	        && { if test -f $@; then exit 0; else break; fi; }; \
	      exit 1;; \
	  esac; \
	done; \
	echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu src/Makefile'; \
	$(am__cd) $(top_srcdir) && \
	  $(AUTOMAKE) --gnu src/Makefile
.PRECIOUS: Makefile
Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
	@case '$?' in \
	  *config.status*) \
	    cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \
	  *) \
	    echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \
	    cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \
	esac;

$(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh

$(top_srcdir)/configure:  $(am__configure_deps)
	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
$(ACLOCAL_M4):  $(am__aclocal_m4_deps)
	cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
$(am__aclocal_m4_deps):
install-binPROGRAMS: $(bin_PROGRAMS)
	@$(NORMAL_INSTALL)
	test -z "$(bindir)" || $(MKDIR_P) "$(DESTDIR)$(bindir)"
	@list='$(bin_PROGRAMS)'; test -n "$(bindir)" || list=; \
	for p in $$list; do echo "$$p $$p"; done | \
	sed 's/$(EXEEXT)$$//' | \
	while read p p1; do if test -f $$p || test -f $$p1; \
	  then echo "$$p"; echo "$$p"; else :; fi; \
	done | \
	sed -e 'p;s,.*/,,;n;h' -e 's|.*|.|' \
	    -e 'p;x;s,.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/' | \
	sed 'N;N;N;s,\n, ,g' | \
	$(AWK) 'BEGIN { files["."] = ""; dirs["."] = 1 } \
	  { d=$$3; if (dirs[d] != 1) { print "d", d; dirs[d] = 1 } \
	    if ($$2 == $$4) files[d] = files[d] " " $$1; \
	    else { print "f", $$3 "/" $$4, $$1; } } \
	  END { for (d in files) print "f", d, files[d] }' | \
	while read type dir files; do \
	    if test "$$dir" = .; then dir=; else dir=/$$dir; fi; \
	    test -z "$$files" || { \
	    echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL_PROGRAM) $$files '$(DESTDIR)$(bindir)$$dir'"; \
	    $(INSTALL_PROGRAM_ENV) $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL_PROGRAM) $$files "$(DESTDIR)$(bindir)$$dir" || exit $$?; \
	    } \
	; done

uninstall-binPROGRAMS:
	@$(NORMAL_UNINSTALL)
	@list='$(bin_PROGRAMS)'; test -n "$(bindir)" || list=; \
	files=`for p in $$list; do echo "$$p"; done | \
	  sed -e 'h;s,^.*/,,;s/$(EXEEXT)$$//;$(transform)' \
	      -e 's/$$/$(EXEEXT)/' `; \
	test -n "$$list" || exit 0; \
	echo " ( cd '$(DESTDIR)$(bindir)' && rm -f" $$files ")"; \
	cd "$(DESTDIR)$(bindir)" && rm -f $$files

clean-binPROGRAMS:
	@list='$(bin_PROGRAMS)'; test -n "$$list" || exit 0; \
	echo " rm -f" $$list; \
	rm -f $$list || exit $$?; \
	test -n "$(EXEEXT)" || exit 0; \
	list=`for p in $$list; do echo "$$p"; done | sed 's/$(EXEEXT)$$//'`; \
	echo " rm -f" $$list; \
	rm -f $$list
freecontact$(EXEEXT): $(freecontact_OBJECTS) $(freecontact_DEPENDENCIES) 
	@rm -f freecontact$(EXEEXT)
	$(freecontact_LINK) $(freecontact_OBJECTS) $(freecontact_LDADD) $(LIBS)
install-dist_pkgdataSCRIPTS: $(dist_pkgdata_SCRIPTS)
	@$(NORMAL_INSTALL)
	test -z "$(pkgdatadir)" || $(MKDIR_P) "$(DESTDIR)$(pkgdatadir)"
	@list='$(dist_pkgdata_SCRIPTS)'; test -n "$(pkgdatadir)" || list=; \
	for p in $$list; do \
	  if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
	  if test -f "$$d$$p"; then echo "$$d$$p"; echo "$$p"; else :; fi; \
	done | \
	sed -e 'p;s,.*/,,;n' \
	    -e 'h;s|.*|.|' \
	    -e 'p;x;s,.*/,,;$(transform)' | sed 'N;N;N;s,\n, ,g' | \
	$(AWK) 'BEGIN { files["."] = ""; dirs["."] = 1; } \
	  { d=$$3; if (dirs[d] != 1) { print "d", d; dirs[d] = 1 } \
	    if ($$2 == $$4) { files[d] = files[d] " " $$1; \
	      if (++n[d] == $(am__install_max)) { \
		print "f", d, files[d]; n[d] = 0; files[d] = "" } } \
	    else { print "f", d "/" $$4, $$1 } } \
	  END { for (d in files) print "f", d, files[d] }' | \
	while read type dir files; do \
	     if test "$$dir" = .; then dir=; else dir=/$$dir; fi; \
	     test -z "$$files" || { \
	       echo " $(INSTALL_SCRIPT) $$files '$(DESTDIR)$(pkgdatadir)$$dir'"; \
	       $(INSTALL_SCRIPT) $$files "$(DESTDIR)$(pkgdatadir)$$dir" || exit $$?; \
	     } \
	; done

uninstall-dist_pkgdataSCRIPTS:
	@$(NORMAL_UNINSTALL)
	@list='$(dist_pkgdata_SCRIPTS)'; test -n "$(pkgdatadir)" || exit 0; \
	files=`for p in $$list; do echo "$$p"; done | \
	       sed -e 's,.*/,,;$(transform)'`; \
	test -n "$$list" || exit 0; \
	echo " ( cd '$(DESTDIR)$(pkgdatadir)' && rm -f" $$files ")"; \
	cd "$(DESTDIR)$(pkgdatadir)" && rm -f $$files

mostlyclean-compile:
	-rm -f *.$(OBJEXT)

distclean-compile:
	-rm -f *.tab.c

include ./$(DEPDIR)/freecontact-$(BIOXSD)_xsd.Po
include ./$(DEPDIR)/freecontact-_write_bioxsd.Po
include ./$(DEPDIR)/freecontact-freecontact.Po
include ./$(DEPDIR)/freecontact-freecontact_input_xsd.Po
include ./$(DEPDIR)/freecontact-freecontact_output_xsd.Po

.cpp.o:
	$(CXXCOMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
	$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
#	source='$<' object='$@' libtool=no \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(CXXCOMPILE) -c -o $@ $<

.cpp.obj:
	$(CXXCOMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ `$(CYGPATH_W) '$<'`
	$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
#	source='$<' object='$@' libtool=no \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(CXXCOMPILE) -c -o $@ `$(CYGPATH_W) '$<'`

.cpp.lo:
	$(LTCXXCOMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
	$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Plo
#	source='$<' object='$@' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(LTCXXCOMPILE) -c -o $@ $<

freecontact-freecontact.o: freecontact.cpp
	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -MT freecontact-freecontact.o -MD -MP -MF $(DEPDIR)/freecontact-freecontact.Tpo -c -o freecontact-freecontact.o `test -f 'freecontact.cpp' || echo '$(srcdir)/'`freecontact.cpp
	$(am__mv) $(DEPDIR)/freecontact-freecontact.Tpo $(DEPDIR)/freecontact-freecontact.Po
#	source='freecontact.cpp' object='freecontact-freecontact.o' libtool=no \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -c -o freecontact-freecontact.o `test -f 'freecontact.cpp' || echo '$(srcdir)/'`freecontact.cpp

freecontact-freecontact.obj: freecontact.cpp
	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -MT freecontact-freecontact.obj -MD -MP -MF $(DEPDIR)/freecontact-freecontact.Tpo -c -o freecontact-freecontact.obj `if test -f 'freecontact.cpp'; then $(CYGPATH_W) 'freecontact.cpp'; else $(CYGPATH_W) '$(srcdir)/freecontact.cpp'; fi`
	$(am__mv) $(DEPDIR)/freecontact-freecontact.Tpo $(DEPDIR)/freecontact-freecontact.Po
#	source='freecontact.cpp' object='freecontact-freecontact.obj' libtool=no \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -c -o freecontact-freecontact.obj `if test -f 'freecontact.cpp'; then $(CYGPATH_W) 'freecontact.cpp'; else $(CYGPATH_W) '$(srcdir)/freecontact.cpp'; fi`

freecontact-_write_bioxsd.o: _write_bioxsd.cpp
	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -MT freecontact-_write_bioxsd.o -MD -MP -MF $(DEPDIR)/freecontact-_write_bioxsd.Tpo -c -o freecontact-_write_bioxsd.o `test -f '_write_bioxsd.cpp' || echo '$(srcdir)/'`_write_bioxsd.cpp
	$(am__mv) $(DEPDIR)/freecontact-_write_bioxsd.Tpo $(DEPDIR)/freecontact-_write_bioxsd.Po
#	source='_write_bioxsd.cpp' object='freecontact-_write_bioxsd.o' libtool=no \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -c -o freecontact-_write_bioxsd.o `test -f '_write_bioxsd.cpp' || echo '$(srcdir)/'`_write_bioxsd.cpp

freecontact-_write_bioxsd.obj: _write_bioxsd.cpp
	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -MT freecontact-_write_bioxsd.obj -MD -MP -MF $(DEPDIR)/freecontact-_write_bioxsd.Tpo -c -o freecontact-_write_bioxsd.obj `if test -f '_write_bioxsd.cpp'; then $(CYGPATH_W) '_write_bioxsd.cpp'; else $(CYGPATH_W) '$(srcdir)/_write_bioxsd.cpp'; fi`
	$(am__mv) $(DEPDIR)/freecontact-_write_bioxsd.Tpo $(DEPDIR)/freecontact-_write_bioxsd.Po
#	source='_write_bioxsd.cpp' object='freecontact-_write_bioxsd.obj' libtool=no \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -c -o freecontact-_write_bioxsd.obj `if test -f '_write_bioxsd.cpp'; then $(CYGPATH_W) '_write_bioxsd.cpp'; else $(CYGPATH_W) '$(srcdir)/_write_bioxsd.cpp'; fi`

freecontact-freecontact_input_xsd.o: freecontact_input_xsd.cxx
	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -MT freecontact-freecontact_input_xsd.o -MD -MP -MF $(DEPDIR)/freecontact-freecontact_input_xsd.Tpo -c -o freecontact-freecontact_input_xsd.o `test -f 'freecontact_input_xsd.cxx' || echo '$(srcdir)/'`freecontact_input_xsd.cxx
	$(am__mv) $(DEPDIR)/freecontact-freecontact_input_xsd.Tpo $(DEPDIR)/freecontact-freecontact_input_xsd.Po
#	source='freecontact_input_xsd.cxx' object='freecontact-freecontact_input_xsd.o' libtool=no \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -c -o freecontact-freecontact_input_xsd.o `test -f 'freecontact_input_xsd.cxx' || echo '$(srcdir)/'`freecontact_input_xsd.cxx

freecontact-freecontact_input_xsd.obj: freecontact_input_xsd.cxx
	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -MT freecontact-freecontact_input_xsd.obj -MD -MP -MF $(DEPDIR)/freecontact-freecontact_input_xsd.Tpo -c -o freecontact-freecontact_input_xsd.obj `if test -f 'freecontact_input_xsd.cxx'; then $(CYGPATH_W) 'freecontact_input_xsd.cxx'; else $(CYGPATH_W) '$(srcdir)/freecontact_input_xsd.cxx'; fi`
	$(am__mv) $(DEPDIR)/freecontact-freecontact_input_xsd.Tpo $(DEPDIR)/freecontact-freecontact_input_xsd.Po
#	source='freecontact_input_xsd.cxx' object='freecontact-freecontact_input_xsd.obj' libtool=no \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -c -o freecontact-freecontact_input_xsd.obj `if test -f 'freecontact_input_xsd.cxx'; then $(CYGPATH_W) 'freecontact_input_xsd.cxx'; else $(CYGPATH_W) '$(srcdir)/freecontact_input_xsd.cxx'; fi`

freecontact-freecontact_output_xsd.o: freecontact_output_xsd.cxx
	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -MT freecontact-freecontact_output_xsd.o -MD -MP -MF $(DEPDIR)/freecontact-freecontact_output_xsd.Tpo -c -o freecontact-freecontact_output_xsd.o `test -f 'freecontact_output_xsd.cxx' || echo '$(srcdir)/'`freecontact_output_xsd.cxx
	$(am__mv) $(DEPDIR)/freecontact-freecontact_output_xsd.Tpo $(DEPDIR)/freecontact-freecontact_output_xsd.Po
#	source='freecontact_output_xsd.cxx' object='freecontact-freecontact_output_xsd.o' libtool=no \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -c -o freecontact-freecontact_output_xsd.o `test -f 'freecontact_output_xsd.cxx' || echo '$(srcdir)/'`freecontact_output_xsd.cxx

freecontact-freecontact_output_xsd.obj: freecontact_output_xsd.cxx
	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -MT freecontact-freecontact_output_xsd.obj -MD -MP -MF $(DEPDIR)/freecontact-freecontact_output_xsd.Tpo -c -o freecontact-freecontact_output_xsd.obj `if test -f 'freecontact_output_xsd.cxx'; then $(CYGPATH_W) 'freecontact_output_xsd.cxx'; else $(CYGPATH_W) '$(srcdir)/freecontact_output_xsd.cxx'; fi`
	$(am__mv) $(DEPDIR)/freecontact-freecontact_output_xsd.Tpo $(DEPDIR)/freecontact-freecontact_output_xsd.Po
#	source='freecontact_output_xsd.cxx' object='freecontact-freecontact_output_xsd.obj' libtool=no \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -c -o freecontact-freecontact_output_xsd.obj `if test -f 'freecontact_output_xsd.cxx'; then $(CYGPATH_W) 'freecontact_output_xsd.cxx'; else $(CYGPATH_W) '$(srcdir)/freecontact_output_xsd.cxx'; fi`

freecontact-$(BIOXSD)_xsd.o: $(BIOXSD)_xsd.cxx
	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -MT freecontact-$(BIOXSD)_xsd.o -MD -MP -MF $(DEPDIR)/freecontact-$(BIOXSD)_xsd.Tpo -c -o freecontact-$(BIOXSD)_xsd.o `test -f '$(BIOXSD)_xsd.cxx' || echo '$(srcdir)/'`$(BIOXSD)_xsd.cxx
	$(am__mv) $(DEPDIR)/freecontact-$(BIOXSD)_xsd.Tpo $(DEPDIR)/freecontact-$(BIOXSD)_xsd.Po
#	source='$(BIOXSD)_xsd.cxx' object='freecontact-$(BIOXSD)_xsd.o' libtool=no \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -c -o freecontact-$(BIOXSD)_xsd.o `test -f '$(BIOXSD)_xsd.cxx' || echo '$(srcdir)/'`$(BIOXSD)_xsd.cxx

freecontact-$(BIOXSD)_xsd.obj: $(BIOXSD)_xsd.cxx
	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -MT freecontact-$(BIOXSD)_xsd.obj -MD -MP -MF $(DEPDIR)/freecontact-$(BIOXSD)_xsd.Tpo -c -o freecontact-$(BIOXSD)_xsd.obj `if test -f '$(BIOXSD)_xsd.cxx'; then $(CYGPATH_W) '$(BIOXSD)_xsd.cxx'; else $(CYGPATH_W) '$(srcdir)/$(BIOXSD)_xsd.cxx'; fi`
	$(am__mv) $(DEPDIR)/freecontact-$(BIOXSD)_xsd.Tpo $(DEPDIR)/freecontact-$(BIOXSD)_xsd.Po
#	source='$(BIOXSD)_xsd.cxx' object='freecontact-$(BIOXSD)_xsd.obj' libtool=no \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(CXX) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(freecontact_CPPFLAGS) $(CPPFLAGS) $(AM_CXXFLAGS) $(CXXFLAGS) -c -o freecontact-$(BIOXSD)_xsd.obj `if test -f '$(BIOXSD)_xsd.cxx'; then $(CYGPATH_W) '$(BIOXSD)_xsd.cxx'; else $(CYGPATH_W) '$(srcdir)/$(BIOXSD)_xsd.cxx'; fi`

.cxx.o:
	$(CXXCOMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
	$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
#	source='$<' object='$@' libtool=no \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(CXXCOMPILE) -c -o $@ $<

.cxx.obj:
	$(CXXCOMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ `$(CYGPATH_W) '$<'`
	$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
#	source='$<' object='$@' libtool=no \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(CXXCOMPILE) -c -o $@ `$(CYGPATH_W) '$<'`

.cxx.lo:
	$(LTCXXCOMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
	$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Plo
#	source='$<' object='$@' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) \
#	$(LTCXXCOMPILE) -c -o $@ $<

mostlyclean-libtool:
	-rm -f *.lo

clean-libtool:
	-rm -rf .libs _libs
install-man1: $(man_MANS)
	@$(NORMAL_INSTALL)
	test -z "$(man1dir)" || $(MKDIR_P) "$(DESTDIR)$(man1dir)"
	@list=''; test -n "$(man1dir)" || exit 0; \
	{ for i in $$list; do echo "$$i"; done; \
	l2='$(man_MANS)'; for i in $$l2; do echo "$$i"; done | \
	  sed -n '/\.1[a-z]*$$/p'; \
	} | while read p; do \
	  if test -f $$p; then d=; else d="$(srcdir)/"; fi; \
	  echo "$$d$$p"; echo "$$p"; \
	done | \
	sed -e 'n;s,.*/,,;p;h;s,.*\.,,;s,^[^1][0-9a-z]*$$,1,;x' \
	      -e 's,\.[0-9a-z]*$$,,;$(transform);G;s,\n,.,' | \
	sed 'N;N;s,\n, ,g' | { \
	list=; while read file base inst; do \
	  if test "$$base" = "$$inst"; then list="$$list $$file"; else \
	    echo " $(INSTALL_DATA) '$$file' '$(DESTDIR)$(man1dir)/$$inst'"; \
	    $(INSTALL_DATA) "$$file" "$(DESTDIR)$(man1dir)/$$inst" || exit $$?; \
	  fi; \
	done; \
	for i in $$list; do echo "$$i"; done | $(am__base_list) | \
	while read files; do \
	  test -z "$$files" || { \
	    echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(man1dir)'"; \
	    $(INSTALL_DATA) $$files "$(DESTDIR)$(man1dir)" || exit $$?; }; \
	done; }

uninstall-man1:
	@$(NORMAL_UNINSTALL)
	@list=''; test -n "$(man1dir)" || exit 0; \
	files=`{ for i in $$list; do echo "$$i"; done; \
	l2='$(man_MANS)'; for i in $$l2; do echo "$$i"; done | \
	  sed -n '/\.1[a-z]*$$/p'; \
	} | sed -e 's,.*/,,;h;s,.*\.,,;s,^[^1][0-9a-z]*$$,1,;x' \
	      -e 's,\.[0-9a-z]*$$,,;$(transform);G;s,\n,.,'`; \
	test -z "$$files" || { \
	  echo " ( cd '$(DESTDIR)$(man1dir)' && rm -f" $$files ")"; \
	  cd "$(DESTDIR)$(man1dir)" && rm -f $$files; }
install-dist_examplesDATA: $(dist_examples_DATA)
	@$(NORMAL_INSTALL)
	test -z "$(examplesdir)" || $(MKDIR_P) "$(DESTDIR)$(examplesdir)"
	@list='$(dist_examples_DATA)'; test -n "$(examplesdir)" || list=; \
	for p in $$list; do \
	  if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
	  echo "$$d$$p"; \
	done | $(am__base_list) | \
	while read files; do \
	  echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(examplesdir)'"; \
	  $(INSTALL_DATA) $$files "$(DESTDIR)$(examplesdir)" || exit $$?; \
	done

uninstall-dist_examplesDATA:
	@$(NORMAL_UNINSTALL)
	@list='$(dist_examples_DATA)'; test -n "$(examplesdir)" || list=; \
	files=`for p in $$list; do echo $$p; done | sed -e 's|^.*/||'`; \
	test -n "$$files" || exit 0; \
	echo " ( cd '$(DESTDIR)$(examplesdir)' && rm -f" $$files ")"; \
	cd "$(DESTDIR)$(examplesdir)" && rm -f $$files
install-dist_pkgdataDATA: $(dist_pkgdata_DATA)
	@$(NORMAL_INSTALL)
	test -z "$(pkgdatadir)" || $(MKDIR_P) "$(DESTDIR)$(pkgdatadir)"
	@list='$(dist_pkgdata_DATA)'; test -n "$(pkgdatadir)" || list=; \
	for p in $$list; do \
	  if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
	  echo "$$d$$p"; \
	done | $(am__base_list) | \
	while read files; do \
	  echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(pkgdatadir)'"; \
	  $(INSTALL_DATA) $$files "$(DESTDIR)$(pkgdatadir)" || exit $$?; \
	done

uninstall-dist_pkgdataDATA:
	@$(NORMAL_UNINSTALL)
	@list='$(dist_pkgdata_DATA)'; test -n "$(pkgdatadir)" || list=; \
	files=`for p in $$list; do echo $$p; done | sed -e 's|^.*/||'`; \
	test -n "$$files" || exit 0; \
	echo " ( cd '$(DESTDIR)$(pkgdatadir)' && rm -f" $$files ")"; \
	cd "$(DESTDIR)$(pkgdatadir)" && rm -f $$files

ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES)
	list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \
	unique=`for i in $$list; do \
	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
	  done | \
	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
	      END { if (nonempty) { for (i in files) print i; }; }'`; \
	mkid -fID $$unique
tags: TAGS

TAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
		$(TAGS_FILES) $(LISP)
	set x; \
	here=`pwd`; \
	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
	unique=`for i in $$list; do \
	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
	  done | \
	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
	      END { if (nonempty) { for (i in files) print i; }; }'`; \
	shift; \
	if test -z "$(ETAGS_ARGS)$$*$$unique"; then :; else \
	  test -n "$$unique" || unique=$$empty_fix; \
	  if test $$# -gt 0; then \
	    $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
	      "$$@" $$unique; \
	  else \
	    $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \
	      $$unique; \
	  fi; \
	fi
ctags: CTAGS
CTAGS:  $(HEADERS) $(SOURCES)  $(TAGS_DEPENDENCIES) \
		$(TAGS_FILES) $(LISP)
	list='$(SOURCES) $(HEADERS)  $(LISP) $(TAGS_FILES)'; \
	unique=`for i in $$list; do \
	    if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \
	  done | \
	  $(AWK) '{ files[$$0] = 1; nonempty = 1; } \
	      END { if (nonempty) { for (i in files) print i; }; }'`; \
	test -z "$(CTAGS_ARGS)$$unique" \
	  || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \
	     $$unique

GTAGS:
	here=`$(am__cd) $(top_builddir) && pwd` \
	  && $(am__cd) $(top_srcdir) \
	  && gtags -i $(GTAGS_ARGS) "$$here"

distclean-tags:
	-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags

check-TESTS: $(TESTS)
	@failed=0; all=0; xfail=0; xpass=0; skip=0; \
	srcdir=$(srcdir); export srcdir; \
	list=' $(TESTS) '; \
	$(am__tty_colors); \
	if test -n "$$list"; then \
	  for tst in $$list; do \
	    if test -f ./$$tst; then dir=./; \
	    elif test -f $$tst; then dir=; \
	    else dir="$(srcdir)/"; fi; \
	    if $(TESTS_ENVIRONMENT) $${dir}$$tst; then \
	      all=`expr $$all + 1`; \
	      case " $(XFAIL_TESTS) " in \
	      *[\ \	]$$tst[\ \	]*) \
		xpass=`expr $$xpass + 1`; \
		failed=`expr $$failed + 1`; \
		col=$$red; res=XPASS; \
	      ;; \
	      *) \
		col=$$grn; res=PASS; \
	      ;; \
	      esac; \
	    elif test $$? -ne 77; then \
	      all=`expr $$all + 1`; \
	      case " $(XFAIL_TESTS) " in \
	      *[\ \	]$$tst[\ \	]*) \
		xfail=`expr $$xfail + 1`; \
		col=$$lgn; res=XFAIL; \
	      ;; \
	      *) \
		failed=`expr $$failed + 1`; \
		col=$$red; res=FAIL; \
	      ;; \
	      esac; \
	    else \
	      skip=`expr $$skip + 1`; \
	      col=$$blu; res=SKIP; \
	    fi; \
	    echo "$${col}$$res$${std}: $$tst"; \
	  done; \
	  if test "$$all" -eq 1; then \
	    tests="test"; \
	    All=""; \
	  else \
	    tests="tests"; \
	    All="All "; \
	  fi; \
	  if test "$$failed" -eq 0; then \
	    if test "$$xfail" -eq 0; then \
	      banner="$$All$$all $$tests passed"; \
	    else \
	      if test "$$xfail" -eq 1; then failures=failure; else failures=failures; fi; \
	      banner="$$All$$all $$tests behaved as expected ($$xfail expected $$failures)"; \
	    fi; \
	  else \
	    if test "$$xpass" -eq 0; then \
	      banner="$$failed of $$all $$tests failed"; \
	    else \
	      if test "$$xpass" -eq 1; then passes=pass; else passes=passes; fi; \
	      banner="$$failed of $$all $$tests did not behave as expected ($$xpass unexpected $$passes)"; \
	    fi; \
	  fi; \
	  dashes="$$banner"; \
	  skipped=""; \
	  if test "$$skip" -ne 0; then \
	    if test "$$skip" -eq 1; then \
	      skipped="($$skip test was not run)"; \
	    else \
	      skipped="($$skip tests were not run)"; \
	    fi; \
	    test `echo "$$skipped" | wc -c` -le `echo "$$banner" | wc -c` || \
	      dashes="$$skipped"; \
	  fi; \
	  report=""; \
	  if test "$$failed" -ne 0 && test -n "$(PACKAGE_BUGREPORT)"; then \
	    report="Please report to $(PACKAGE_BUGREPORT)"; \
	    test `echo "$$report" | wc -c` -le `echo "$$banner" | wc -c` || \
	      dashes="$$report"; \
	  fi; \
	  dashes=`echo "$$dashes" | sed s/./=/g`; \
	  if test "$$failed" -eq 0; then \
	    echo "$$grn$$dashes"; \
	  else \
	    echo "$$red$$dashes"; \
	  fi; \
	  echo "$$banner"; \
	  test -z "$$skipped" || echo "$$skipped"; \
	  test -z "$$report" || echo "$$report"; \
	  echo "$$dashes$$std"; \
	  test "$$failed" -eq 0; \
	else :; fi

distdir: $(DISTFILES)
	@list='$(MANS)'; if test -n "$$list"; then \
	  list=`for p in $$list; do \
	    if test -f $$p; then d=; else d="$(srcdir)/"; fi; \
	    if test -f "$$d$$p"; then echo "$$d$$p"; else :; fi; done`; \
	  if test -n "$$list" && \
	    grep 'ab help2man is required to generate this page' $$list >/dev/null; then \
	    echo "error: found man pages containing the \`missing help2man' replacement text:" >&2; \
	    grep -l 'ab help2man is required to generate this page' $$list | sed 's/^/         /' >&2; \
	    echo "       to fix them, install help2man, remove and regenerate the man pages;" >&2; \
	    echo "       typically \`make maintainer-clean' will remove them" >&2; \
	    exit 1; \
	  else :; fi; \
	else :; fi
	@srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
	topsrcdirstrip=`echo "$(top_srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
	list='$(DISTFILES)'; \
	  dist_files=`for file in $$list; do echo $$file; done | \
	  sed -e "s|^$$srcdirstrip/||;t" \
	      -e "s|^$$topsrcdirstrip/|$(top_builddir)/|;t"`; \
	case $$dist_files in \
	  */*) $(MKDIR_P) `echo "$$dist_files" | \
			   sed '/\//!d;s|^|$(distdir)/|;s,/[^/]*$$,,' | \
			   sort -u` ;; \
	esac; \
	for file in $$dist_files; do \
	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
	  if test -d $$d/$$file; then \
	    dir=`echo "/$$file" | sed -e 's,/[^/]*$$,,'`; \
	    if test -d "$(distdir)/$$file"; then \
	      find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
	    fi; \
	    if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
	      cp -fpR $(srcdir)/$$file "$(distdir)$$dir" || exit 1; \
	      find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
	    fi; \
	    cp -fpR $$d/$$file "$(distdir)$$dir" || exit 1; \
	  else \
	    test -f "$(distdir)/$$file" \
	    || cp -p $$d/$$file "$(distdir)/$$file" \
	    || exit 1; \
	  fi; \
	done
check-am: all-am
	$(MAKE) $(AM_MAKEFLAGS) $(dist_check_SCRIPTS)
	$(MAKE) $(AM_MAKEFLAGS) check-TESTS
check: check-am
all-am: Makefile $(PROGRAMS) $(SCRIPTS) $(MANS) $(DATA)
installdirs:
	for dir in "$(DESTDIR)$(bindir)" "$(DESTDIR)$(pkgdatadir)" "$(DESTDIR)$(man1dir)" "$(DESTDIR)$(examplesdir)" "$(DESTDIR)$(pkgdatadir)"; do \
	  test -z "$$dir" || $(MKDIR_P) "$$dir"; \
	done
install: install-am
install-exec: install-exec-am
install-data: install-data-am
uninstall: uninstall-am

install-am: all-am
	@$(MAKE) $(AM_MAKEFLAGS) install-exec-am install-data-am

installcheck: installcheck-am
install-strip:
	$(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
	  install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
	  `test -z '$(STRIP)' || \
	    echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
mostlyclean-generic:

clean-generic:

distclean-generic:
	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
	-test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)

maintainer-clean-generic:
	@echo "This command is intended for maintainers to use"
	@echo "it deletes files that may require special tools to rebuild."
clean: clean-am

clean-am: clean-binPROGRAMS clean-generic clean-libtool clean-local \
	mostlyclean-am

distclean: distclean-am
	-rm -rf ./$(DEPDIR)
	-rm -f Makefile
distclean-am: clean-am distclean-compile distclean-generic \
	distclean-tags

dvi: dvi-am

dvi-am:

html: html-am

html-am:

info: info-am

info-am:

install-data-am: install-dist_examplesDATA install-dist_pkgdataDATA \
	install-dist_pkgdataSCRIPTS install-man

install-dvi: install-dvi-am

install-dvi-am:

install-exec-am: install-binPROGRAMS

install-html: install-html-am

install-html-am:

install-info: install-info-am

install-info-am:

install-man: install-man1

install-pdf: install-pdf-am

install-pdf-am:

install-ps: install-ps-am

install-ps-am:

installcheck-am:

maintainer-clean: maintainer-clean-am
	-rm -rf ./$(DEPDIR)
	-rm -f Makefile
maintainer-clean-am: distclean-am maintainer-clean-generic

mostlyclean: mostlyclean-am

mostlyclean-am: mostlyclean-compile mostlyclean-generic \
	mostlyclean-libtool

pdf: pdf-am

pdf-am:

ps: ps-am

ps-am:

uninstall-am: uninstall-binPROGRAMS uninstall-dist_examplesDATA \
	uninstall-dist_pkgdataDATA uninstall-dist_pkgdataSCRIPTS \
	uninstall-man

uninstall-man: uninstall-man1

.MAKE: check-am install-am install-strip

.PHONY: CTAGS GTAGS all all-am check check-TESTS check-am clean \
	clean-binPROGRAMS clean-generic clean-libtool clean-local \
	ctags distclean distclean-compile distclean-generic \
	distclean-libtool distclean-tags distdir dvi dvi-am html \
	html-am info info-am install install-am install-binPROGRAMS \
	install-data install-data-am install-dist_examplesDATA \
	install-dist_pkgdataDATA install-dist_pkgdataSCRIPTS \
	install-dvi install-dvi-am install-exec install-exec-am \
	install-html install-html-am install-info install-info-am \
	install-man install-man1 install-pdf install-pdf-am install-ps \
	install-ps-am install-strip installcheck installcheck-am \
	installdirs maintainer-clean maintainer-clean-generic \
	mostlyclean mostlyclean-compile mostlyclean-generic \
	mostlyclean-libtool pdf pdf-am ps ps-am tags uninstall \
	uninstall-am uninstall-binPROGRAMS uninstall-dist_examplesDATA \
	uninstall-dist_pkgdataDATA uninstall-dist_pkgdataSCRIPTS \
	uninstall-man uninstall-man1


$(man_MANS) : %.1 : %.cpp
	sed -e 's|__pkgdatadir__|$(pkgdatadir)|g;s|__examplesdir__|$(examplesdir)|g;s|__sysconfdir__|$(sysconfdir)|g;s|__bindir__|$(bindir)|g;s|__PACKAGE_VERSION__|$(PACKAGE_VERSION)|g' "$<" | \
	pod2man --utf8 -c 'User Commands' -r "$(VERSION)" -name $(shell echo "$(basename $@)" | tr '[:lower:]' '[:upper:]') > "$@"

#.SECONDARY: freecontact_input_xsd.cxx freecontact_input_xsd.hxx freecontact_output_xsd.cxx freecontact_output_xsd.hxx
#%_xsd.cxx %_xsd.hxx : %.xsd
#	$(XSDCXX) cxx-tree --location-map http://bioxsd.org/$(BIOXSD).xsd=$(BIOXSD).xsd \
#		--namespace-map http://rostlab.org/freecontact/input=freecontact_input_xsd \
#		--namespace-map http://rostlab.org/freecontact/output=freecontact_output_xsd \
#		--namespace-map http://bioxsd.org/BioXSD-1.1=BioXSD \
#		--generate-serialization --generate-doxygen \
#		--generate-polymorphic --polymorphic-type-all \
#		--omit-default-attributes \
#		--root-element-all \
#		--hxx-suffix _xsd.hxx --cxx-suffix _xsd.cxx \
#		$<

#freecontact_input_xsd.hxx : $(BIOXSD)_xsd.hxx
#freecontact_input_xsd.cxx : $(BIOXSD)_xsd.hxx
#freecontact_output_xsd.hxx : $(BIOXSD)_xsd.hxx
#freecontact_output_xsd.cxx : $(BIOXSD)_xsd.hxx
#_write_bioxsd.cpp : freecontact_input_xsd.hxx freecontact_output_xsd.hxx $(BIOXSD)_xsd.hxx

clean-local:
	rm -f $(man_MANS) $(XSDSOURCES)
	rm -f freecontact.static
freecontact.static: freecontact
	$(freecontact_LINK) -all-static -L$(STATIC_LAPACK_LIBDIR) $(freecontact_OBJECTS) $(freecontact_LDADD) $(LIBS)

#include $(srcdir)/glassotest.mk

# Tell versions [3.59,3.63) of GNU make to not export all variables.
# Otherwise a system limit (for SysV at least) may be exceeded.
.NOEXPORT:
