BLASTP 2.2.8 [Jan-05-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= T0569_seqalg
         (79 letters)

Database: dataset 
           22,064 sequences; 5,101,384 total letters

Searching.............................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

1CI3M                                                              24   6.3    2 

>1CI3M
          Length = 249

 Score = 23.9 bits (47), Expect(2) = 6.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 28  KTDDSTTYTVTIPDGYEYVGTDGGVVSS 55
           +T+D TT    IP G E + ++G  V++
Sbjct: 196 RTEDGTTIVDKIPAGPELIVSEGEEVAA 223



 Score = 16.8 bits (31), Expect(2) = 6.3
 Identities = 5/17 (29%), Positives = 8/17 (47%)

Query: 17  AQVGDIVTVTGKTDDST 33
           A    ++T   K DD +
Sbjct: 174 ASAAGVITAIAKADDGS 190


  Database: dataset
    Posted date:  Mar 20, 2005  6:04 PM
  Number of letters in database: 5,101,384
  Number of sequences in database:  22,064
  
Lambda     K      H
   0.310    0.133    0.374 


Matrix: BLOSUM62
Number of Hits to DB: 1,017,364
Number of Sequences: 22064
Number of extensions: 45718
Number of successful extensions: 2845
Number of sequences better than 10.0: 1
length of query: 79
length of database: 5,101,384
effective HSP length: 45
effective length of query: 34
effective length of database: 4,108,504
effective search space: 139689136
effective search space used: 139689136
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 33 (14.7 bits)
S1: 42 (21.7 bits)
S2: 47 (23.9 bits)