Rosetta Graphics output and Graphical User Interfaces

Graphics Output

OpenGL Graphics mode

Pymol Mover

Background

The PyMOL Mover is a way to visualize your decoy (PDB) in PyMOL. One of its most powerful features is that it can color your decoy by score, or some component of the total score, as well.

The PyMOL Mover can be accessed through RosettaScripts, PyRosetta, or at the command line.

Usage

RosettaScripts

Relevant Flags:

PyRosetta

Command Line

-show_simulation_in_pymol

-keep_pymol_simulation_history

Drawbacks and workarounds

Graphical User Interfaces

Fold-It

PyRosetta Toolkit