BLASTP 2.2.17 [Aug-26-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= domain0
         (91 letters)

Database: pdb_cm 
           180,940 sequences; 47,973,432 total letters

Searching..................................................done



 ***** No hits found ******

Searching..................................................done



 ***** No hits found ******

  Database: pdb_cm
    Posted date:  Oct 3, 2018  2:50 PM
  Number of letters in database: 47,973,432
  Number of sequences in database:  180,940
  
Lambda     K      H
   0.314    0.124    0.371 

Lambda     K      H
   0.267   0.0381    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,312,262
Number of Sequences: 180940
Number of extensions: 484743
Number of successful extensions: 792
Number of sequences better than  5.0: 0
Number of HSP's better than  5.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 792
Number of HSP's gapped (non-prelim): 0
length of query: 91
length of database: 47,973,432
effective HSP length: 59
effective length of query: 32
effective length of database: 37,297,972
effective search space: 1193535104
effective search space used: 1193535104
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.2 bits)