BLASTP 2.2.17 [Aug-26-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= domain0
         (91 letters)

Database: nr90 
           38,209,907 sequences; 13,267,535,841 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002295227.1| predicted protein [Thalassiosira pseudonana ...    51   2e-04

[blastpgp] WARNING:  [000.000]  posPurgeMatches: Due to purging near identical sequences, only the query is used to construct the position-specific score matrix

Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

ref|XP_002295227.1| predicted protein [Thalassiosira pseudonana ...    54   2e-05

Sequences not found previously or not previously below threshold:


CONVERGED!
  Database: nr90
    Posted date:  Apr 26, 2016  9:17 PM
  Number of letters in database: 999,999,869
  Number of sequences in database:  2,968,906
  
  Database: /home/tools/nr/nr90.01
    Posted date:  Apr 26, 2016  9:25 PM
  Number of letters in database: 999,999,914
  Number of sequences in database:  2,935,762
  
  Database: /home/tools/nr/nr90.02
    Posted date:  Apr 26, 2016  9:31 PM
  Number of letters in database: 999,999,821
  Number of sequences in database:  2,945,360
  
  Database: /home/tools/nr/nr90.03
    Posted date:  Apr 26, 2016  9:37 PM
  Number of letters in database: 999,999,954
  Number of sequences in database:  3,021,637
  
  Database: /home/tools/nr/nr90.04
    Posted date:  Apr 26, 2016  9:43 PM
  Number of letters in database: 999,999,583
  Number of sequences in database:  2,827,669
  
  Database: /home/tools/nr/nr90.05
    Posted date:  Apr 26, 2016  9:49 PM
  Number of letters in database: 999,999,687
  Number of sequences in database:  2,825,486
  
  Database: /home/tools/nr/nr90.06
    Posted date:  Apr 26, 2016  9:54 PM
  Number of letters in database: 999,999,983
  Number of sequences in database:  3,029,836
  
  Database: /home/tools/nr/nr90.07
    Posted date:  Apr 26, 2016  9:59 PM
  Number of letters in database: 999,999,170
  Number of sequences in database:  2,783,631
  
  Database: /home/tools/nr/nr90.08
    Posted date:  Apr 26, 2016 10:05 PM
  Number of letters in database: 999,999,929
  Number of sequences in database:  2,932,162
  
  Database: /home/tools/nr/nr90.09
    Posted date:  Apr 26, 2016 10:10 PM
  Number of letters in database: 999,999,922
  Number of sequences in database:  2,760,536
  
  Database: /home/tools/nr/nr90.10
    Posted date:  Apr 26, 2016 10:15 PM
  Number of letters in database: 999,998,575
  Number of sequences in database:  2,773,472
  
  Database: /home/tools/nr/nr90.11
    Posted date:  Apr 26, 2016 10:20 PM
  Number of letters in database: 999,999,809
  Number of sequences in database:  2,868,040
  
  Database: /home/tools/nr/nr90.12
    Posted date:  Apr 26, 2016 10:26 PM
  Number of letters in database: 999,999,981
  Number of sequences in database:  2,827,487
  
  Database: /home/tools/nr/nr90.13
    Posted date:  Apr 26, 2016 10:28 PM
  Number of letters in database: 267,539,644
  Number of sequences in database:  709,923
  
Lambda     K      H
   0.314    0.124    0.371 

Lambda     K      H
   0.267   0.0381    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,499,329,572
Number of Sequences: 38209907
Number of extensions: 147111372
Number of successful extensions: 348374
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 348372
Number of HSP's gapped (non-prelim): 2
length of query: 91
length of database: 13,267,535,841
effective HSP length: 61
effective length of query: 30
effective length of database: 15,231,698,810
effective search space: 456950964300
effective search space used: 456950964300
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.5 bits)