BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= domain0 (91 letters) Database: uniref90 70,056,378 sequences; 23,724,371,664 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef90_B8CG97 Uncharacterized protein n=1 Tax=Thalassiosira ps... 51 3e-04 >UniRef90_B8CG97 Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG97_THAPS Length = 237 Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 24/24 (100%), Positives = 24/24 (100%) Query: 68 MCMHVDLQVAMSSILSKLTGKDDT 91 MCMHVDLQVAMSSILSKLTGKDDT Sbjct: 1 MCMHVDLQVAMSSILSKLTGKDDT 24 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: Sequences not found previously or not previously below threshold: UniRef90_B8CG97 Uncharacterized protein n=1 Tax=Thalassiosira ps... 54 3e-05 >UniRef90_B8CG97 Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG97_THAPS Length = 237 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 24/24 (100%), Positives = 24/24 (100%) Query: 68 MCMHVDLQVAMSSILSKLTGKDDT 91 MCMHVDLQVAMSSILSKLTGKDDT Sbjct: 1 MCMHVDLQVAMSSILSKLTGKDDT 24 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef90_B8CG97 Uncharacterized protein n=1 Tax=Thalassiosira ps... 54 3e-05 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef90_B8CG97 Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG97_THAPS Length = 237 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 24/24 (100%), Positives = 24/24 (100%) Query: 68 MCMHVDLQVAMSSILSKLTGKDDT 91 MCMHVDLQVAMSSILSKLTGKDDT Sbjct: 1 MCMHVDLQVAMSSILSKLTGKDDT 24 Database: uniref90 Posted date: Mar 5, 2018 1:12 PM Number of letters in database: 999,999,963 Number of sequences in database: 2,877,805 Database: /home/casp13/uniref/uniref90.01 Posted date: Mar 5, 2018 1:14 PM Number of letters in database: 999,999,867 Number of sequences in database: 2,271,643 Database: /home/casp13/uniref/uniref90.02 Posted date: Mar 5, 2018 1:15 PM Number of letters in database: 999,999,892 Number of sequences in database: 2,337,629 Database: /home/casp13/uniref/uniref90.03 Posted date: Mar 5, 2018 1:16 PM Number of letters in database: 999,999,890 Number of sequences in database: 2,373,365 Database: /home/casp13/uniref/uniref90.04 Posted date: Mar 5, 2018 1:17 PM Number of letters in database: 999,999,958 Number of sequences in database: 2,482,055 Database: /home/casp13/uniref/uniref90.05 Posted date: Mar 5, 2018 1:18 PM Number of letters in database: 999,999,016 Number of sequences in database: 2,691,555 Database: /home/casp13/uniref/uniref90.06 Posted date: Mar 5, 2018 1:20 PM Number of letters in database: 999,999,819 Number of sequences in database: 3,172,423 Database: /home/casp13/uniref/uniref90.07 Posted date: Mar 5, 2018 1:21 PM Number of letters in database: 999,999,879 Number of sequences in database: 3,272,745 Database: /home/casp13/uniref/uniref90.08 Posted date: Mar 5, 2018 1:23 PM Number of letters in database: 999,999,650 Number of sequences in database: 3,282,067 Database: /home/casp13/uniref/uniref90.09 Posted date: Mar 5, 2018 1:24 PM Number of letters in database: 999,999,786 Number of sequences in database: 3,299,491 Database: /home/casp13/uniref/uniref90.10 Posted date: Mar 5, 2018 1:26 PM Number of letters in database: 999,999,996 Number of sequences in database: 3,229,471 Database: /home/casp13/uniref/uniref90.11 Posted date: Mar 5, 2018 1:27 PM Number of letters in database: 999,999,625 Number of sequences in database: 3,282,329 Database: /home/casp13/uniref/uniref90.12 Posted date: Mar 5, 2018 1:29 PM Number of letters in database: 999,999,737 Number of sequences in database: 3,239,830 Database: /home/casp13/uniref/uniref90.13 Posted date: Mar 5, 2018 1:31 PM Number of letters in database: 999,999,688 Number of sequences in database: 3,248,497 Database: /home/casp13/uniref/uniref90.14 Posted date: Mar 5, 2018 1:32 PM Number of letters in database: 999,999,725 Number of sequences in database: 3,191,607 Database: /home/casp13/uniref/uniref90.15 Posted date: Mar 5, 2018 1:33 PM Number of letters in database: 999,999,790 Number of sequences in database: 3,240,857 Database: /home/casp13/uniref/uniref90.16 Posted date: Mar 5, 2018 1:35 PM Number of letters in database: 999,999,892 Number of sequences in database: 3,247,903 Database: /home/casp13/uniref/uniref90.17 Posted date: Mar 5, 2018 1:37 PM Number of letters in database: 999,999,793 Number of sequences in database: 3,514,303 Database: /home/casp13/uniref/uniref90.18 Posted date: Mar 5, 2018 1:39 PM Number of letters in database: 999,999,927 Number of sequences in database: 2,742,274 Database: /home/casp13/uniref/uniref90.19 Posted date: Mar 5, 2018 1:41 PM Number of letters in database: 999,999,903 Number of sequences in database: 2,897,731 Database: /home/casp13/uniref/uniref90.20 Posted date: Mar 5, 2018 1:43 PM Number of letters in database: 999,999,225 Number of sequences in database: 2,744,429 Database: /home/casp13/uniref/uniref90.21 Posted date: Mar 5, 2018 1:44 PM Number of letters in database: 999,999,862 Number of sequences in database: 2,520,923 Database: /home/casp13/uniref/uniref90.22 Posted date: Mar 5, 2018 1:46 PM Number of letters in database: 999,999,379 Number of sequences in database: 2,885,596 Database: /home/casp13/uniref/uniref90.23 Posted date: Mar 5, 2018 1:48 PM Number of letters in database: 724,377,402 Number of sequences in database: 2,009,850 Lambda K H 0.314 0.124 0.371 Lambda K H 0.267 0.0381 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,849,052,410 Number of Sequences: 70056378 Number of extensions: 382450996 Number of successful extensions: 886882 Number of sequences better than 1.0e-03: 1 Number of HSP's better than 0.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 886879 Number of HSP's gapped (non-prelim): 3 length of query: 91 length of database: 23,724,371,664 effective HSP length: 61 effective length of query: 30 effective length of database: 23,745,899,902 effective search space: 712376997060 effective search space used: 712376997060 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 116 (49.4 bits)