% SAM: /home/chengji/software/sam3.5.i686-linux//bin/hmmscore v3.5 (July 15, 2005) compiled 07/18/05_16:55:18 % (c) 1992-2001 Regents of the University of California, Santa Cruz % % Sequence Alignment and Modeling Software System % http://www.cse.ucsc.edu/research/compbio/sam.html % % ----------------- Citations (SAM, SAM-T2K, HMMs) -------------------- % R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: % Extension and analysis of the basic method, CABIOS 12:95-107, 1996. % K. Karplus, et al., What is the value added by human intervention in protein % structure prediction, Proteins: Stucture, Function, Genetics 45(S5):86--91, 2001. % A. Krogh et al., Hidden Markov models in computational biology: % Applications to protein modeling, JMB 235:1501-1531, Feb 1994. % --------------------------------------------------------------------- % domain0 Host: sunflower.rnet.missouri.edu Sun May 5 13:24:14 2019 % jh7x3 Dir: /home/casp11/multicom/ZCA_155705426023607/domain0/sam % --------------------------------------------------------------------- % Inserted Files: domain0.mod % Database Files: /home/chengji/software/prosys_database/fr_lib/sort90 % MODLIBMOD domain0.mod domain0 model number 1 % Calibration data for 52151 database sequences % 27301 of 52151 scores > calibrate_threshold (0) used. insert domain0.mod lambda 3.749989 tau 0.707894 sw 2 dpstyle 0 jumpinprob 1.000000 jumpoutprob 1.000000 subtractnull 4 FIMmethodscore -6 insertmethodscore 0 adjust_score 2 ENDMODLIBMOD