BLASTP 2.2.17 [Aug-26-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= domain1
         (218 letters)

Database: pdb_cm 
           180,940 sequences; 47,973,432 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3BOHA                                                                 319   2e-87
3BOJA                                                                 318   5e-87
3UK8A                                                                 313   1e-85
3UK8B                                                                 313   2e-85
3BOBA                                                                 312   2e-85
5DVJA                                                                  36   0.059
5DVFA                                                                  36   0.060
5DVIA                                                                  36   0.060
1W6TA                                                                  32   1.00 
1W6TB                                                                  32   1.00 

>3BOHA
          Length = 213

 Score =  319 bits (819), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 168/209 (80%), Positives = 188/209 (89%)

Query: 9   PLTPKDIVAALQSRGWEAEIISASSISQDMVEVDPAGILKCVDGRGSDNTRMAGPKMPGG 68
            LTP  IVAALQ RGW+AEI++  S+  +MV+VDP GILKCVDGRGSDNT+  GPKMPGG
Sbjct: 4   SLTPDQIVAALQERGWQAEIVTEFSLLNEMVDVDPQGILKCVDGRGSDNTQFCGPKMPGG 63

Query: 69  IYAIAHNRGTTSVDGLKEITKEVASKGHVPSVHGDHSADMLGCGFFRLWVTGEFDSMGYP 128
           IYAIAHNRG T+++GLK+ITKEVASKGHVPSVHGDHS+DMLGCGFF+LWVTG FD MGYP
Sbjct: 64  IYAIAHNRGVTTLEGLKQITKEVASKGHVPSVHGDHSSDMLGCGFFKLWVTGRFDDMGYP 123

Query: 129 RPEFDADQGAAAVKESGGVIEMHHGSHTEKVVYINLVENKTLEPDENDQRFIVDGWAAIK 188
           RP+FDADQGA AV+ +GGVIEMHHGSH EKVVYINLVENKTLEPDE+DQRFIVDGWAA K
Sbjct: 124 RPQFDADQGAKAVENAGGVIEMHHGSHAEKVVYINLVENKTLEPDEDDQRFIVDGWAAGK 183

Query: 189 FNLDVVKFLVAAAATVEMLGGPRIAKIVV 217
           F LDV KFL+AAAATVEMLGGP+ AKIV+
Sbjct: 184 FGLDVPKFLIAAAATVEMLGGPKKAKIVI 212


>3BOJA
          Length = 209

 Score =  318 bits (815), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 168/208 (80%), Positives = 188/208 (90%)

Query: 10  LTPKDIVAALQSRGWEAEIISASSISQDMVEVDPAGILKCVDGRGSDNTRMAGPKMPGGI 69
           LTP  IVAALQ RGW+AEI++  S+  +MV+VDP GILKCVDGRGSDNT+  GPKMPGGI
Sbjct: 1   LTPDQIVAALQERGWQAEIVTEFSLLNEMVDVDPQGILKCVDGRGSDNTQFCGPKMPGGI 60

Query: 70  YAIAHNRGTTSVDGLKEITKEVASKGHVPSVHGDHSADMLGCGFFRLWVTGEFDSMGYPR 129
           YAIAHNRG T+++GLK+ITKEVASKGHVPSVHGDHS+DMLGCGFF+LWVTG FD MGYPR
Sbjct: 61  YAIAHNRGVTTLEGLKQITKEVASKGHVPSVHGDHSSDMLGCGFFKLWVTGRFDDMGYPR 120

Query: 130 PEFDADQGAAAVKESGGVIEMHHGSHTEKVVYINLVENKTLEPDENDQRFIVDGWAAIKF 189
           P+FDADQGA AV+ +GGVIEMHHGSH EKVVYINLVENKTLEPDE+DQRFIVDGWAA KF
Sbjct: 121 PQFDADQGAKAVENAGGVIEMHHGSHAEKVVYINLVENKTLEPDEDDQRFIVDGWAAGKF 180

Query: 190 NLDVVKFLVAAAATVEMLGGPRIAKIVV 217
            LDV KFL+AAAATVEMLGGP+ AKIV+
Sbjct: 181 GLDVPKFLIAAAATVEMLGGPKKAKIVI 208


>3UK8A
          Length = 214

 Score =  313 bits (804), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 161/209 (77%), Positives = 185/209 (88%)

Query: 9   PLTPKDIVAALQSRGWEAEIISASSISQDMVEVDPAGILKCVDGRGSDNTRMAGPKMPGG 68
            +TP  IV+AL+ RGW+A I+ AS++S ++  VDP GILKCVDGRGSDNT+  GPKMPGG
Sbjct: 5   SITPPQIVSALRGRGWKASIVKASTMSSELKRVDPQGILKCVDGRGSDNTQFGGPKMPGG 64

Query: 69  IYAIAHNRGTTSVDGLKEITKEVASKGHVPSVHGDHSADMLGCGFFRLWVTGEFDSMGYP 128
           IYAIAHNRG T+++GLK+IT+EVASKGHVPSVHGDHS+DMLGCGFF+LW+TG FD MGYP
Sbjct: 65  IYAIAHNRGVTTLEGLKDITREVASKGHVPSVHGDHSSDMLGCGFFKLWLTGRFDDMGYP 124

Query: 129 RPEFDADQGAAAVKESGGVIEMHHGSHTEKVVYINLVENKTLEPDENDQRFIVDGWAAIK 188
           RPEFDADQGA AV+ +GGVIEMHHGSH EKVVYINLV   TLEP+E+DQRFIVDGWAA K
Sbjct: 125 RPEFDADQGALAVRAAGGVIEMHHGSHEEKVVYINLVSGMTLEPNEHDQRFIVDGWAASK 184

Query: 189 FNLDVVKFLVAAAATVEMLGGPRIAKIVV 217
           F LDVVKFLVAAAATVEMLGGP+ AKIV+
Sbjct: 185 FGLDVVKFLVAAAATVEMLGGPKKAKIVI 213


>3UK8B
          Length = 209

 Score =  313 bits (802), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 161/208 (77%), Positives = 185/208 (88%)

Query: 10  LTPKDIVAALQSRGWEAEIISASSISQDMVEVDPAGILKCVDGRGSDNTRMAGPKMPGGI 69
           +TP  IV+AL+ RGW+A I+ AS++S ++  VDP GILKCVDGRGSDNT+  GPKMPGGI
Sbjct: 1   ITPPQIVSALRGRGWKASIVKASTMSSELKRVDPQGILKCVDGRGSDNTQFGGPKMPGGI 60

Query: 70  YAIAHNRGTTSVDGLKEITKEVASKGHVPSVHGDHSADMLGCGFFRLWVTGEFDSMGYPR 129
           YAIAHNRG T+++GLK+IT+EVASKGHVPSVHGDHS+DMLGCGFF+LW+TG FD MGYPR
Sbjct: 61  YAIAHNRGVTTLEGLKDITREVASKGHVPSVHGDHSSDMLGCGFFKLWLTGRFDDMGYPR 120

Query: 130 PEFDADQGAAAVKESGGVIEMHHGSHTEKVVYINLVENKTLEPDENDQRFIVDGWAAIKF 189
           PEFDADQGA AV+ +GGVIEMHHGSH EKVVYINLV   TLEP+E+DQRFIVDGWAA KF
Sbjct: 121 PEFDADQGALAVRAAGGVIEMHHGSHEEKVVYINLVSGMTLEPNEHDQRFIVDGWAASKF 180

Query: 190 NLDVVKFLVAAAATVEMLGGPRIAKIVV 217
            LDVVKFLVAAAATVEMLGGP+ AKIV+
Sbjct: 181 GLDVVKFLVAAAATVEMLGGPKKAKIVI 208


>3BOBA
          Length = 209

 Score =  312 bits (801), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 164/208 (78%), Positives = 188/208 (90%)

Query: 10  LTPKDIVAALQSRGWEAEIISASSISQDMVEVDPAGILKCVDGRGSDNTRMAGPKMPGGI 69
           ++P  I  ALQ RGW+AEI++ +S++  +V+V P GILKCVDGRGSDNTRM GPKMPGGI
Sbjct: 1   ISPAQIAEALQGRGWDAEIVTDASMAGQLVDVRPEGILKCVDGRGSDNTRMGGPKMPGGI 60

Query: 70  YAIAHNRGTTSVDGLKEITKEVASKGHVPSVHGDHSADMLGCGFFRLWVTGEFDSMGYPR 129
           YAIAHNRG TS++GLK+ITKEVASKGH+PSVHGDHS+DMLGCGFF+LWVTG FD MGYPR
Sbjct: 61  YAIAHNRGVTSIEGLKQITKEVASKGHLPSVHGDHSSDMLGCGFFKLWVTGRFDDMGYPR 120

Query: 130 PEFDADQGAAAVKESGGVIEMHHGSHTEKVVYINLVENKTLEPDENDQRFIVDGWAAIKF 189
           P+FDADQGA AVK++GG+IEMHHGSHTEKVVYINL+ NKTLEP+ENDQRFIVDGWAA KF
Sbjct: 121 PQFDADQGANAVKDAGGIIEMHHGSHTEKVVYINLLANKTLEPNENDQRFIVDGWAADKF 180

Query: 190 NLDVVKFLVAAAATVEMLGGPRIAKIVV 217
            LDV KFL+AAAATVEMLGGP+ AKIVV
Sbjct: 181 GLDVPKFLIAAAATVEMLGGPKNAKIVV 208


>5DVJA
          Length = 396

 Score = 35.8 bits (82), Expect = 0.059,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 73  AHNRGTTSVDGLKEITKEVASKGHVPSVHGD 103
           A  +  T++D L     ++ + G +P  HG 
Sbjct: 133 AGAKVPTTLDELFAAADKLKAAGFIPLAHGG 163


>5DVFA
          Length = 389

 Score = 35.8 bits (82), Expect = 0.060,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 73  AHNRGTTSVDGLKEITKEVASKGHVPSVHGD 103
           A  +  T++D L     ++ + G +P  HG 
Sbjct: 126 AGAKVPTTLDELFAAADKLKAAGFIPLAHGG 156


>5DVIA
          Length = 395

 Score = 35.8 bits (82), Expect = 0.060,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 73  AHNRGTTSVDGLKEITKEVASKGHVPSVHGD 103
           A  +  T++D L     ++ + G +P  HG 
Sbjct: 133 AGAKVPTTLDELFAAADKLKAAGFIPLAHGG 163


>1W6TA
          Length = 428

 Score = 31.5 bits (71), Expect = 1.00,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 4/33 (12%)

Query: 67  GGIYAIAHNRGTTSVDGLKEITKEVASKGHVPS 99
           GG       R   + DG++ I   + + G+VP 
Sbjct: 204 GGF----APRFEGTEDGVETILAAIEAAGYVPG 232


>1W6TB
          Length = 430

 Score = 31.5 bits (71), Expect = 1.00,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 4/33 (12%)

Query: 67  GGIYAIAHNRGTTSVDGLKEITKEVASKGHVPS 99
           GG       R   + DG++ I   + + G+VP 
Sbjct: 204 GGF----APRFEGTEDGVETILAAIEAAGYVPG 232


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

3BOHA                                                                 453   e-127
3BOJA                                                                 451   e-127
3BOBA                                                                 442   e-124
3UK8A                                                                 440   e-124
3UK8B                                                                 440   e-124

Sequences not found previously or not previously below threshold:

3O8OB                                                                  37   0.030
3O8OF                                                                  37   0.030
4C7UA                                                                  36   0.041
4C7UB                                                                  36   0.041
4C7UC                                                                  36   0.041
4C7UE                                                                  36   0.041
4C7UG                                                                  36   0.041
4C7UF                                                                  35   0.12 


CONVERGED!
>3BOHA
          Length = 213

 Score =  453 bits (1165), Expect = e-127,   Method: Composition-based stats.
 Identities = 168/209 (80%), Positives = 188/209 (89%)

Query: 9   PLTPKDIVAALQSRGWEAEIISASSISQDMVEVDPAGILKCVDGRGSDNTRMAGPKMPGG 68
            LTP  IVAALQ RGW+AEI++  S+  +MV+VDP GILKCVDGRGSDNT+  GPKMPGG
Sbjct: 4   SLTPDQIVAALQERGWQAEIVTEFSLLNEMVDVDPQGILKCVDGRGSDNTQFCGPKMPGG 63

Query: 69  IYAIAHNRGTTSVDGLKEITKEVASKGHVPSVHGDHSADMLGCGFFRLWVTGEFDSMGYP 128
           IYAIAHNRG T+++GLK+ITKEVASKGHVPSVHGDHS+DMLGCGFF+LWVTG FD MGYP
Sbjct: 64  IYAIAHNRGVTTLEGLKQITKEVASKGHVPSVHGDHSSDMLGCGFFKLWVTGRFDDMGYP 123

Query: 129 RPEFDADQGAAAVKESGGVIEMHHGSHTEKVVYINLVENKTLEPDENDQRFIVDGWAAIK 188
           RP+FDADQGA AV+ +GGVIEMHHGSH EKVVYINLVENKTLEPDE+DQRFIVDGWAA K
Sbjct: 124 RPQFDADQGAKAVENAGGVIEMHHGSHAEKVVYINLVENKTLEPDEDDQRFIVDGWAAGK 183

Query: 189 FNLDVVKFLVAAAATVEMLGGPRIAKIVV 217
           F LDV KFL+AAAATVEMLGGP+ AKIV+
Sbjct: 184 FGLDVPKFLIAAAATVEMLGGPKKAKIVI 212


>3BOJA
          Length = 209

 Score =  451 bits (1161), Expect = e-127,   Method: Composition-based stats.
 Identities = 168/208 (80%), Positives = 188/208 (90%)

Query: 10  LTPKDIVAALQSRGWEAEIISASSISQDMVEVDPAGILKCVDGRGSDNTRMAGPKMPGGI 69
           LTP  IVAALQ RGW+AEI++  S+  +MV+VDP GILKCVDGRGSDNT+  GPKMPGGI
Sbjct: 1   LTPDQIVAALQERGWQAEIVTEFSLLNEMVDVDPQGILKCVDGRGSDNTQFCGPKMPGGI 60

Query: 70  YAIAHNRGTTSVDGLKEITKEVASKGHVPSVHGDHSADMLGCGFFRLWVTGEFDSMGYPR 129
           YAIAHNRG T+++GLK+ITKEVASKGHVPSVHGDHS+DMLGCGFF+LWVTG FD MGYPR
Sbjct: 61  YAIAHNRGVTTLEGLKQITKEVASKGHVPSVHGDHSSDMLGCGFFKLWVTGRFDDMGYPR 120

Query: 130 PEFDADQGAAAVKESGGVIEMHHGSHTEKVVYINLVENKTLEPDENDQRFIVDGWAAIKF 189
           P+FDADQGA AV+ +GGVIEMHHGSH EKVVYINLVENKTLEPDE+DQRFIVDGWAA KF
Sbjct: 121 PQFDADQGAKAVENAGGVIEMHHGSHAEKVVYINLVENKTLEPDEDDQRFIVDGWAAGKF 180

Query: 190 NLDVVKFLVAAAATVEMLGGPRIAKIVV 217
            LDV KFL+AAAATVEMLGGP+ AKIV+
Sbjct: 181 GLDVPKFLIAAAATVEMLGGPKKAKIVI 208


>3BOBA
          Length = 209

 Score =  442 bits (1137), Expect = e-124,   Method: Composition-based stats.
 Identities = 164/208 (78%), Positives = 188/208 (90%)

Query: 10  LTPKDIVAALQSRGWEAEIISASSISQDMVEVDPAGILKCVDGRGSDNTRMAGPKMPGGI 69
           ++P  I  ALQ RGW+AEI++ +S++  +V+V P GILKCVDGRGSDNTRM GPKMPGGI
Sbjct: 1   ISPAQIAEALQGRGWDAEIVTDASMAGQLVDVRPEGILKCVDGRGSDNTRMGGPKMPGGI 60

Query: 70  YAIAHNRGTTSVDGLKEITKEVASKGHVPSVHGDHSADMLGCGFFRLWVTGEFDSMGYPR 129
           YAIAHNRG TS++GLK+ITKEVASKGH+PSVHGDHS+DMLGCGFF+LWVTG FD MGYPR
Sbjct: 61  YAIAHNRGVTSIEGLKQITKEVASKGHLPSVHGDHSSDMLGCGFFKLWVTGRFDDMGYPR 120

Query: 130 PEFDADQGAAAVKESGGVIEMHHGSHTEKVVYINLVENKTLEPDENDQRFIVDGWAAIKF 189
           P+FDADQGA AVK++GG+IEMHHGSHTEKVVYINL+ NKTLEP+ENDQRFIVDGWAA KF
Sbjct: 121 PQFDADQGANAVKDAGGIIEMHHGSHTEKVVYINLLANKTLEPNENDQRFIVDGWAADKF 180

Query: 190 NLDVVKFLVAAAATVEMLGGPRIAKIVV 217
            LDV KFL+AAAATVEMLGGP+ AKIVV
Sbjct: 181 GLDVPKFLIAAAATVEMLGGPKNAKIVV 208


>3UK8A
          Length = 214

 Score =  440 bits (1133), Expect = e-124,   Method: Composition-based stats.
 Identities = 161/209 (77%), Positives = 185/209 (88%)

Query: 9   PLTPKDIVAALQSRGWEAEIISASSISQDMVEVDPAGILKCVDGRGSDNTRMAGPKMPGG 68
            +TP  IV+AL+ RGW+A I+ AS++S ++  VDP GILKCVDGRGSDNT+  GPKMPGG
Sbjct: 5   SITPPQIVSALRGRGWKASIVKASTMSSELKRVDPQGILKCVDGRGSDNTQFGGPKMPGG 64

Query: 69  IYAIAHNRGTTSVDGLKEITKEVASKGHVPSVHGDHSADMLGCGFFRLWVTGEFDSMGYP 128
           IYAIAHNRG T+++GLK+IT+EVASKGHVPSVHGDHS+DMLGCGFF+LW+TG FD MGYP
Sbjct: 65  IYAIAHNRGVTTLEGLKDITREVASKGHVPSVHGDHSSDMLGCGFFKLWLTGRFDDMGYP 124

Query: 129 RPEFDADQGAAAVKESGGVIEMHHGSHTEKVVYINLVENKTLEPDENDQRFIVDGWAAIK 188
           RPEFDADQGA AV+ +GGVIEMHHGSH EKVVYINLV   TLEP+E+DQRFIVDGWAA K
Sbjct: 125 RPEFDADQGALAVRAAGGVIEMHHGSHEEKVVYINLVSGMTLEPNEHDQRFIVDGWAASK 184

Query: 189 FNLDVVKFLVAAAATVEMLGGPRIAKIVV 217
           F LDVVKFLVAAAATVEMLGGP+ AKIV+
Sbjct: 185 FGLDVVKFLVAAAATVEMLGGPKKAKIVI 213


>3UK8B
          Length = 209

 Score =  440 bits (1131), Expect = e-124,   Method: Composition-based stats.
 Identities = 161/208 (77%), Positives = 185/208 (88%)

Query: 10  LTPKDIVAALQSRGWEAEIISASSISQDMVEVDPAGILKCVDGRGSDNTRMAGPKMPGGI 69
           +TP  IV+AL+ RGW+A I+ AS++S ++  VDP GILKCVDGRGSDNT+  GPKMPGGI
Sbjct: 1   ITPPQIVSALRGRGWKASIVKASTMSSELKRVDPQGILKCVDGRGSDNTQFGGPKMPGGI 60

Query: 70  YAIAHNRGTTSVDGLKEITKEVASKGHVPSVHGDHSADMLGCGFFRLWVTGEFDSMGYPR 129
           YAIAHNRG T+++GLK+IT+EVASKGHVPSVHGDHS+DMLGCGFF+LW+TG FD MGYPR
Sbjct: 61  YAIAHNRGVTTLEGLKDITREVASKGHVPSVHGDHSSDMLGCGFFKLWLTGRFDDMGYPR 120

Query: 130 PEFDADQGAAAVKESGGVIEMHHGSHTEKVVYINLVENKTLEPDENDQRFIVDGWAAIKF 189
           PEFDADQGA AV+ +GGVIEMHHGSH EKVVYINLV   TLEP+E+DQRFIVDGWAA KF
Sbjct: 121 PEFDADQGALAVRAAGGVIEMHHGSHEEKVVYINLVSGMTLEPNEHDQRFIVDGWAASKF 180

Query: 190 NLDVVKFLVAAAATVEMLGGPRIAKIVV 217
            LDVVKFLVAAAATVEMLGGP+ AKIV+
Sbjct: 181 GLDVVKFLVAAAATVEMLGGPKKAKIVI 208


>3O8OB
          Length = 763

 Score = 36.9 bits (84), Expect = 0.030,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 14  DIVAALQSRGWEAEII--SASSISQDMVEVDPAGILKCVDGRGSDNTRMA--GPKMPGGI 69
           DIV+  +SRG    I+  +  +I+ D+  + P+ + K +  R   +TR+   G    GG 
Sbjct: 234 DIVSKHRSRGKRTTIVVVAEGAIAADLTPISPSDVHKVLVDRLGLDTRITTLGHVQRGGT 293

Query: 70  YAIAHNRGTTSVDGLKEITKEVASKGHVPS 99
            A+A++R   ++ GL+ +   + S    PS
Sbjct: 294 -AVAYDRILATLQGLEAVNAVLESTPDTPS 322


>3O8OF
          Length = 762

 Score = 36.9 bits (84), Expect = 0.030,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 14  DIVAALQSRGWEAEII--SASSISQDMVEVDPAGILKCVDGRGSDNTRMA--GPKMPGGI 69
           DIV+  +SRG    I+  +  +I+ D+  + P+ + K +  R   +TR+   G    GG 
Sbjct: 233 DIVSKHRSRGKRTTIVVVAEGAIAADLTPISPSDVHKVLVDRLGLDTRITTLGHVQRGGT 292

Query: 70  YAIAHNRGTTSVDGLKEITKEVASKGHVPS 99
            A+A++R   ++ GL+ +   + S    PS
Sbjct: 293 -AVAYDRILATLQGLEAVNAVLESTPDTPS 321


>4C7UA
          Length = 203

 Score = 36.1 bits (82), Expect = 0.041,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 125 MGYPRPEFDADQGAAAVKESGGVIEMHHGSHTEKVV--YINLVENKTLEPDENDQRFIVD 182
           M +  P+   D GA     SG ++++HH  H +  V  Y N +E      ++ D   +V 
Sbjct: 1   MTFTLPDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVNKGDASTVVK 60

Query: 183 GWAAIKFN 190
             +AIKFN
Sbjct: 61  LQSAIKFN 68


>4C7UB
          Length = 202

 Score = 36.1 bits (82), Expect = 0.041,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 125 MGYPRPEFDADQGAAAVKESGGVIEMHHGSHTEKVV--YINLVENKTLEPDENDQRFIVD 182
           M +  P+   D GA     SG ++++HH  H +  V  Y N +E      ++ D   +V 
Sbjct: 2   MTFTLPDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVNKGDASTVVK 61

Query: 183 GWAAIKFN 190
             +AIKFN
Sbjct: 62  LQSAIKFN 69


>4C7UC
          Length = 203

 Score = 36.1 bits (82), Expect = 0.041,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 125 MGYPRPEFDADQGAAAVKESGGVIEMHHGSHTEKVV--YINLVENKTLEPDENDQRFIVD 182
           M +  P+   D GA     SG ++++HH  H +  V  Y N +E      ++ D   +V 
Sbjct: 2   MTFTLPDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVNKGDASTVVK 61

Query: 183 GWAAIKFN 190
             +AIKFN
Sbjct: 62  LQSAIKFN 69


>4C7UE
          Length = 201

 Score = 36.1 bits (82), Expect = 0.041,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 125 MGYPRPEFDADQGAAAVKESGGVIEMHHGSHTEKVV--YINLVENKTLEPDENDQRFIVD 182
           M +  P+   D GA     SG ++++HH  H +  V  Y N +E      ++ D   +V 
Sbjct: 1   MTFTLPDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVNKGDASTVVK 60

Query: 183 GWAAIKFN 190
             +AIKFN
Sbjct: 61  LQSAIKFN 68


>4C7UG
          Length = 202

 Score = 36.1 bits (82), Expect = 0.041,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 125 MGYPRPEFDADQGAAAVKESGGVIEMHHGSHTEKVV--YINLVENKTLEPDENDQRFIVD 182
           M +  P+   D GA     SG ++++HH  H +  V  Y N +E      ++ D   +V 
Sbjct: 1   MTFTLPDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVNKGDASTVVK 60

Query: 183 GWAAIKFN 190
             +AIKFN
Sbjct: 61  LQSAIKFN 68


>4C7UF
          Length = 202

 Score = 34.5 bits (78), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 130 PEFDADQGAAAVKESGGVIEMHHGSHTEKVV--YINLVENKTLEPDENDQRFIVDGWAAI 187
           P+   D GA     SG ++++HH  H +  V  Y N +E      ++ D   +V   +AI
Sbjct: 5   PDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVNKGDASTVVKLQSAI 64

Query: 188 KFN 190
           KFN
Sbjct: 65  KFN 67


  Database: pdb_cm
    Posted date:  Oct 3, 2018  2:50 PM
  Number of letters in database: 47,973,432
  Number of sequences in database:  180,940
  
Lambda     K      H
   0.303    0.144    0.455 

Lambda     K      H
   0.267   0.0458    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,051,359
Number of Sequences: 180940
Number of extensions: 3276262
Number of successful extensions: 9325
Number of sequences better than  1.0: 13
Number of HSP's better than  1.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 9304
Number of HSP's gapped (non-prelim): 32
length of query: 218
length of database: 47,973,432
effective HSP length: 103
effective length of query: 115
effective length of database: 29,336,612
effective search space: 3373710380
effective search space used: 3373710380
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.7 bits)
S2: 71 (31.8 bits)