The process id of the thread 0 is 25466.
start thread 0
run hhsuite:
The process id of the thread 1 is 25467.
start thread 1
run HHsearch12:
The process id of the thread 2 is 25469.
start thread 2
run HHsearch15:
The process id of the thread 3 is 25470.
perl /home/casp13/MULTICOM_NOVEL/scripts/run_hhsearch15.pl  /home/casp11/multicom/ZCA_155705426023607/domain1/novel/domain1.fasta /home/casp11/multicom/ZCA_155705426023607/domain1/novel/HHsearch15/ domain1  /home/casp13/MULTICOM_NOVEL/DB/rspdb &> /home/casp11/multicom/ZCA_155705426023607/domain1/novel/HHsearch15//runHHsearch15.log 
perl /home/casp13/MULTICOM_NOVEL/scripts/run_hhsearch12.pl  /home/casp11/multicom/ZCA_155705426023607/domain1/novel/domain1.fasta /home/casp11/multicom/ZCA_155705426023607/domain1/novel/HHsearch12/ domain1 /home/casp13/MULTICOM_NOVEL/DB/rspdb &> /home/casp11/multicom/ZCA_155705426023607/domain1/novel/HHsearch12//runHHsearch12.log 
perl /home/casp13/MULTICOM_NOVEL/scripts/run_hhsuite.pl  /home/casp11/multicom/ZCA_155705426023607/domain1/novel/domain1.fasta /home/casp11/multicom/ZCA_155705426023607/domain1/novel/HHsuite/ domain1 /home/casp13/MULTICOM_NOVEL/DB/rspdb &> /home/casp11/multicom/ZCA_155705426023607/domain1/novel/HHsuite//runhhsuite.log 
HHsearch12 modeling finished within 2.25138888888889 hrs!
HHsearch15 modeling finished within 2.30888888888889 hrs!
The process id of the thread 4 is 25473.
The main process starts to wait for the base predictors to finish...
HHsuite_finish:1	HHsearch12:1	HHsearch15:1	DeepSF:1
HHsuite_finish:1	HHsearch12:1	HHsearch15:1	DeepSF:1
HHsuite_finish:1	HHsearch12:1	HHsearch15:1	DeepSF:1
HHsuite_finish:1	HHsearch12:1	HHsearch15:1	DeepSF:1
HHsuite_finish:1	HHsearch12:1	HHsearch15:1	DeepSF:1
HHsuite_finish:1	HHsearch12:1	HHsearch15:1	DeepSF:1
HHsuite_finish:1	HHsearch12:1	HHsearch15:1	DeepSF:1
HHsuite_finish:1	HHsearch12:1	HHsearch15:1	DeepSF:1
HHsuite_finish:1	HHsearch12:1	HHsearch15:1	DeepSF:1
HHsuite_finish:1	HHsearch12:1	HHsearch15:1	DeepSF:1
HHsuite_finish:1	HHsearch12:1	HHsearch15:1	DeepSF:1
HHsuite_finish:1	HHsearch12:1	HHsearch15:1	DeepSF:1
HHsuite_finish:1	HHsearch12:1	HHsearch15:1	DeepSF:1
HHsuite_finish:1	HHsearch12:1	HHsearch15:1	DeepSF:1
HHsearch12 modeling finished!
copy HHsearch12 models into <MODELS> directory 
HHsearch12 models are copied to <MODELS> successfully
HHsearch15 modeling finished!
copy HHsearch15 models into <MODELS> directory 
HHsuite modeling finished within 2.65972222222222 hrs!
HHsearch15 models are copied to <MODELS> successfully
HHsuite_finish:1	HHsearch12:0	HHsearch15:0	DeepSF:1
HHsuite_finish:1	HHsearch12:0	HHsearch15:0	DeepSF:1
hhsuite modeling finished!
copy HHsuite models into <MODELS> directory 
start thread 4
run DomainCheck:
Start detecting the hard region from hhsearch12,hhsearch15,hhsuite
Target is easy or medium target, starting checking the coverage and see if hard region exists
perl /home/casp13/MULTICOM_NOVEL/scripts/domain_detect_from_aln.pl /home/casp11/multicom/ZCA_155705426023607/domain1/novel/DomainCheck/ /home/casp11/multicom/ZCA_155705426023607/domain1/novel/domain1.fasta  domain1 /home/casp11/multicom/ZCA_155705426023607/domain1/novel/DomainCheck/ &> /home/casp11/multicom/ZCA_155705426023607/domain1/novel/DomainCheck//runDomainCheck.log 
DomainCheck modeling finished within 2.67722222222222 hrs!
start thread 3
run DeepSF:
perl /home/casp13/deepsf_3d/scripts/deepsf-main-V1-2018-04-09.pl domain1 /home/casp11/multicom/ZCA_155705426023607/domain1/novel/domain1.fasta   /home/casp13/deepsf_3d/scripts/DeepSF_option  /home/casp11/multicom/ZCA_155705426023607/domain1/novel/DeepSF/  &> /home/casp11/multicom/ZCA_155705426023607/domain1/novel/DeepSF//runDeepSF.log
DeepSF modeling finished within 1.51638888888889 hrs!
HHsuite models are copied to <MODELS> successfully
HHsuite_finish:0	HHsearch12:0	HHsearch15:0	DeepSF:1
HHsuite_finish:0	HHsearch12:0	HHsearch15:0	DeepSF:1
HHsuite_finish:0	HHsearch12:0	HHsearch15:0	DeepSF:1
HHsuite_finish:0	HHsearch12:0	HHsearch15:0	DeepSF:1
HHsuite_finish:0	HHsearch12:0	HHsearch15:0	DeepSF:1
HHsuite_finish:0	HHsearch12:0	HHsearch15:0	DeepSF:1
HHsuite_finish:0	HHsearch12:0	HHsearch15:0	DeepSF:1
HHsuite_finish:0	HHsearch12:0	HHsearch15:0	DeepSF:1
HHsuite_finish:0	HHsearch12:0	HHsearch15:0	DeepSF:1
HHsuite_finish:0	HHsearch12:0	HHsearch15:0	DeepSF:1
copy DeepSF models into <MODELS> directory 
DeepSF models are copied to <MODELS> successfully