Protein sequence

>A0A0F6AZ77: 1-552

1-60:

M

I

L

E

R

V

E

I

V

G

F

R

G

I

N

R

L

S

L

M

L

E

Q

N

V

L

I

G

E

N

A

W

G

K

S

L

D

A

L

T

L

S

P

E

L

D

L

Y

H

F

V

R

E

D

F

61-119:

W

F

P

G

D

I

K

G

R

E

H

L

H

I

L

T

F

R

E

T

Q

P

G

R

H

R

V

R

Y

R

A

L

E

A

C

W

S

L

C

E

D

F

H

R

I

F

Y

R

L

E

G

E

C

G

A

121-179:

D

G

S

V

M

T

L

R

S

F

L

N

S

D

G

Q

P

L

V

E

N

I

N

D

Q

V

R

H

L

V

R

L

M

P

V

L

R

L

R

D

A

R

F

M

R

I

R

N

G

T

V

P

N

V

P

D

V

E

181-239:

V

T

A

R

Q

L

D

F

L

A

R

E

L

A

T

R

P

Q

N

L

T

D

G

Q

I

R

Q

G

L

S

A

M

V

Q

L

E

H

Y

F

S

E

Q

G

A

G

Q

A

R

H

R

L

M

R

S

Q

N

E

241-299:

Q

R

S

W

R

Y

L

D

I

N

R

M

I

D

K

P

G

S

R

S

H

R

V

I

L

G

L

F

S

T

L

Q

A

K

G

T

L

R

L

H

K

D

A

R

P

L

V

E

D

P

E

T

R

L

H

301-359:

P

I

M

L

S

V

A

W

Q

L

N

L

P

L

Q

R

I

A

T

N

S

G

E

L

S

L

T

P

V

E

H

V

R

L

V

R

E

S

R

V

A

W

R

L

G

P

G

L

S

A

E

D

361-419:

G

R

I

A

F

H

I

R

F

N

R

A

S

L

F

A

R

C

W

L

V

E

G

E

T

E

T

W

V

I

N

E

L

A

R

Q

C

G

H

F

D

A

E

G

I

K

V

I

E

F

A

Q

S

G

L

K

421-479:

P

L

V

K

F

A

R

M

G

I

E

W

H

V

L

V

D

G

D

E

A

G

K

Y

A

T

V

R

S

L

N

D

R

E

R

E

H

L

T

A

L

P

A

L

D

M

E

H

F

M

Y

R

Q

481-539:

G

F

A

D

V

F

H

R

V

A

Q

L

P

N

V

P

M

N

T

R

K

I

T

K

A

I

H

R

S

K

P

D

L

A

I

E

V

A

M

E

A

G

R

G

I

D

A

V

P

L

F

R

K

M

F

541-552:

S

R

V

W

L

A

R

G

R

A

D

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60:

C

E

C

E

C

E

C

H

C

H

C

E

61-119:

E

C

E

C

H

C

E

C

121-179:

C

E

C

H

C

H

C

H

C

H

181-239:

H

C

H

C

H

241-299:

H

C

H

C

H

C

H

C

E

C

H

C

301-359:

H

C

E

C

H

C

E

C

E

C

H

361-419:

H

C

H

C

E

C

H

C

E

C

421-479:

H

C

E

C

H

C

H

C

E

C

H

C

481-539:

C

H

C

H

C

H

C

H

541-552:

H

C

H(Helix): 241(43.66%)

E(Strand): 84(15.22%)

C(Coil): 227(41.12%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

61-119:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

121-179:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

181-239:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

241-299:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

301-359:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

361-419:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

421-479:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

481-539:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

541-552:

E

B

E

B

E

e(Exposed): 280(50.72%)

b(Buried): 272(49.28%)

Disorder prediction (N: Normal T: Disorder)

1-60:

N

61-119:

N

121-179:

N

181-239:

N

241-299:

N

301-359:

N

361-419:

N

421-479:

N

481-539:

N

541-552:

N

T

N(Normal): 550(99.64%)

T(Disorder): 2(0.36%)

Predicted contact map and distance map

Predicted distance map

Predicted contact map

Probability to Precision

Long-Range	Average probability	Predicted precision
TopL/5	0.90	90.01
TopL/2	0.77	81.09

Note: The linear model (Average probability vs Predicted precision) was trained on CASP14 dataset

Predicted Top 1 Tertiary structure

Predicted Model 1

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d1"[x]

Model 1 vs Contact (Top L/5)

./work/multicom-A0A0F6AZ77/full_length/casp1_contact/L5_long.png

Model 1 vs Contact (Top L/2)

./work/multicom-A0A0F6AZ77/full_length/casp1_contact/L2_long.png

Model 1 vs Contact (Top L)

./work/multicom-A0A0F6AZ77/full_length/casp1_contact/L_long.png

Model 1 vs Contact (Top 2L)

./work/multicom-A0A0F6AZ77/full_length/casp1_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	99.09
TopL/2	93.12
TopL	75.18
Top2L	48.37

( Alignment file )

Alignment	Number
N	16147
Neff	5563

Model comparsion

Model	TM-score
Model 2	0.9195
Model 3	0.9371
Model 4	0.9228
Model 5	0.9056
Average	0.92125

Radius Gyration

RG	RG/(2.0*L^0.4)
28.10	1.12516

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
6p74	0.61165
5xns	0.47692
5xei	0.47633
5dac	0.47175
3euj	0.46353

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 2 Tertiary structure

Predicted Model 2

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d2"[x]

Model 2 vs Contact (Top L/5)

./work/multicom-A0A0F6AZ77/full_length/casp2_contact/L5_long.png

Model 2 vs Contact (Top L/2)

./work/multicom-A0A0F6AZ77/full_length/casp2_contact/L2_long.png

Model 2 vs Contact (Top L)

./work/multicom-A0A0F6AZ77/full_length/casp2_contact/L_long.png

Model 2 vs Contact (Top 2L)

./work/multicom-A0A0F6AZ77/full_length/casp2_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	93.84
TopL	75.18
Top2L	47.37

( Alignment file )

Alignment	Number
N	16147
Neff	5563

Model comparsion

Model	TM-score
Model 1	0.9195
Model 3	0.9250
Model 4	0.8938
Model 5	0.9009
Average	0.90980

Radius Gyration

RG	RG/(2.0*L^0.4)
28.11	1.12556

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
6p74	0.61397
5dac	0.48198
5xei	0.48131
5xns	0.47966
5da9	0.47219

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 3 Tertiary structure

Predicted Model 3

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d3"[x]

Model 3 vs Contact (Top L/5)

./work/multicom-A0A0F6AZ77/full_length/casp3_contact/L5_long.png

Model 3 vs Contact (Top L/2)

./work/multicom-A0A0F6AZ77/full_length/casp3_contact/L2_long.png

Model 3 vs Contact (Top L)

./work/multicom-A0A0F6AZ77/full_length/casp3_contact/L_long.png

Model 3 vs Contact (Top 2L)

./work/multicom-A0A0F6AZ77/full_length/casp3_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	97.27
TopL/2	94.20
TopL	73.37
Top2L	46.29

( Alignment file )

Alignment	Number
N	16147
Neff	5563

Model comparsion

Model	TM-score
Model 1	0.9371
Model 2	0.9250
Model 4	0.9062
Model 5	0.9023
Average	0.91765

Radius Gyration

RG	RG/(2.0*L^0.4)
28.00	1.12116

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
6p74	0.61117
5xei	0.48299
5dac	0.48246
5xns	0.48149
5da9	0.47289

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 4 Tertiary structure

Predicted Model 4

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d4"[x]

Model 4 vs Contact (Top L/5)

./work/multicom-A0A0F6AZ77/full_length/casp4_contact/L5_long.png

Model 4 vs Contact (Top L/2)

./work/multicom-A0A0F6AZ77/full_length/casp4_contact/L2_long.png

Model 4 vs Contact (Top L)

./work/multicom-A0A0F6AZ77/full_length/casp4_contact/L_long.png

Model 4 vs Contact (Top 2L)

./work/multicom-A0A0F6AZ77/full_length/casp4_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	98.18
TopL/2	92.75
TopL	75.00
Top2L	47.74

( Alignment file )

Alignment	Number
N	16147
Neff	5563

Model comparsion

Model	TM-score
Model 1	0.9228
Model 2	0.8938
Model 3	0.9062
Model 5	0.9192
Average	0.91050

Radius Gyration

RG	RG/(2.0*L^0.4)
28.23	1.13037

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
6p74	0.60768
5xei	0.46520
5dac	0.46477
5xns	0.46303
6qj0	0.45551

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 5 Tertiary structure

Predicted Model 5

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d5"[x]

Model 5 vs Contact (Top L/5)

./work/multicom-A0A0F6AZ77/full_length/casp5_contact/L5_long.png

Model 5 vs Contact (Top L/2)

./work/multicom-A0A0F6AZ77/full_length/casp5_contact/L2_long.png

Model 5 vs Contact (Top L)

./work/multicom-A0A0F6AZ77/full_length/casp5_contact/L_long.png

Model 5 vs Contact (Top 2L)

./work/multicom-A0A0F6AZ77/full_length/casp5_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	96.36
TopL/2	91.30
TopL	73.91
Top2L	47.19

( Alignment file )

Alignment	Number
N	16147
Neff	5563

Model comparsion

Model	TM-score
Model 1	0.9056
Model 2	0.9009
Model 3	0.9023
Model 4	0.9192
Average	0.90700

Radius Gyration

RG	RG/(2.0*L^0.4)
28.45	1.13918

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
6p74	0.60322
5xei	0.47289
5dac	0.47131
5xns	0.47108
5da9	0.46285

Note: The model is built by ab initio method, no significant templates are found!

Domain Boundary prediction ( View )

Protein sequence

Secondary structure prediction (H: Helix E: Strand C: Coil)

Solvent accessibility prediction (e: Exposed b: Buried)

Disorder prediction (N: Normal T: Disorder)

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

References

Domain Boundary prediction ( View )

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

References

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )