A0A0F6AZ78
multicom
A0A0F6AZ78
full_length
A0A0F6AZ78
Results of Structure Prediction for Target Name: A0A0F6AZ78 ( Click 
)
Domain Boundary prediction ( View )
>A0A0F6AZ78: 1-322
| 1-60: |
M | S | R | I | T | I | M | T | Q | L | T | D | N | T | W | Y | T | S | D | Y | I | S | P | L | Q | L | F | I | R | L | T | R | G | Q | L | Q | P | G | K | F | W | R | K | A | S | F | R | R | K | F | L | I | R | S | L | V | M | P | R | A |
| 61-119: |
T | S | Q | L | L | T | N | L | T | Q | W | P | E | L | N | T | L | L | A | R | Q | P | R | L | P | I | R | L | H | R | P | Y | M | A | V | N | I | K | R | D | F | A | L | D | A | L | C | F | H | Y | Q | Q | M | R | Q | L | L | S | R | E |
| 121-179: |
Q | Q | V | S | Y | L | S | Q | Y | G | L | N | L | A | K | F | E | T | K | T | G | E | L | F | Q | L | D | L | V | S | L | V | S | L | D | K | E | G | E | S | T | I | V | V | R | D | A | Q | L | R | I | L | A | E | I | T | F | T | L | C |
| 181-239: |
R | F | N | Q | Q | R | T | L | F | I | G | G | L | Q | G | A | A | N | D | V | P | H | E | I | I | Q | Q | A | T | K | A | C | H | G | L | F | P | K | R | I | V | M | E | A | L | C | Q | F | A | Q | V | F | Q | A | E | K | I | I | A | V |
| 241-299: |
S | N | D | A | H | V | Y | R | S | W | R | Y | M | D | K | K | T | Q | M | H | A | D | Y | D | A | F | W | E | S | L | G | G | E | R | I | K | G | N | Y | Y | T | L | P | L | A | I | A | R | K | S | E | A | E | I | A | S | K | K | R | A |
| 301-322: |
E | Y | R | R | R | Y | A | L | L | D | S | V | V | E | Q | V | P | A | T | F | K | R |
| 1-60: |
C | C | C | E | E | E | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | H | H | H | H | H | H | H | H | H | C | C | C | C | C | C | C | C | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | C | H | H | H |
| 61-119: |
H | H | H | H | H | H | H | H | H | C | C | H | H | H | H | H | H | H | H | H | C | C | C | H | H | H | H | C | C | C | H | H | H | H | C | C | C | C | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | C | C | H | H |
| 121-179: |
H | H | H | H | H | H | C | C | C | C | E | E | E | E | E | E | C | C | C | C | C | C | E | E | E | E | E | E | E | C | C | C | C | C | C | C | C | C | E | E | E | E | E | E | E | C | C | C | C | C | E | E | E | E | E | E | E | E | E | E |
| 181-239: |
C | C | C | C | C | E | E | E | E | E | E | E | E | C | C | C | C | C | C | C | H | H | H | H | H | H | H | H | H | H | H | H | C | C | C | C | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | C | C | C | C | E | E | E | E | E |
| 241-299: |
C | C | C | C | C | H | H | H | H | H | H | H | H | C | C | C | C | C | E | E | E | C | H | H | H | H | H | H | H | C | C | C | C | C | C | C | C | C | E | E | E | E | C | C | C | C | C | C | C | C | H | H | H | C | C | H | H | H | H | H |
| 301-322: |
H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | C | C |
| |
| | H(Helix): 151(46.89%) | E(Strand): 53(16.46%) | C(Coil): 118(36.65%) |
| 1-60: |
E | E | E | B | B | E | B | B | E | B | B | E | E | E | B | B | E | E | E | E | E | B | B | B | B | B | B | B | B | B | B | E | E | E | B | E | E | E | E | B | B | E | E | B | E | E | B | B | B | B | B | B | B | B | B | B | B | B | E | B |
| 61-119: |
B | E | E | B | B | E | B | B | E | E | B | E | E | B | E | E | B | B | E | E | B | E | E | B | B | E | E | B | B | B | B | B | B | B | E | E | B | E | B | E | E | B | B | E | B | B | B | E | B | B | E | B | B | B | E | B | B | E | E | E |
| 121-179: |
B | B | E | B | B | B | E | E | E | E | B | B | B | B | E | B | E | E | E | E | E | E | E | B | B | B | B | B | B | B | E | E | E | B | E | E | B | B | B | B | B | B | B | B | B | B | E | E | E | B | B | B | B | B | B | B | B | B | B | B |
| 181-239: |
E | E | E | E | E | B | B | B | B | B | B | B | B | B | B | B | E | E | E | E | B | E | E | B | B | E | E | B | B | E | E | B | E | E | B | B | B | E | B | B | B | B | B | B | B | B | B | B | B | E | B | B | E | B | E | B | B | B | B | B |
| 241-299: |
B | E | E | B | B | B | B | B | B | E | E | B | E | E | E | E | E | E | B | E | B | B | B | E | E | B | B | E | E | B | E | B | E | E | E | E | E | E | B | B | E | B | B | B | E | E | E | E | E | E | B | E | E | B | E | E | E | E | B | E |
| 301-322: |
E | B | E | E | B | B | E | B | B | E | E | B | E | E | E | B | E | E | B | B | E | E |
| |
| | e(Exposed): 143(44.41%) | b(Buried): 179(55.59%) |
| 1-60: |
T | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N |
| 61-119: |
N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N |
| 121-179: |
N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N |
| 181-239: |
N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N |
| 241-299: |
N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N |
| 301-322: |
N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | T |
| |
| | N(Normal): 320(99.38%) | T(Disorder): 2(0.62%) |
Predicted contact map and distance map
|
Predicted distance map
|
|
Predicted contact map
|
Probability to Precision
| Long-Range |
Average probability |
Predicted precision |
| TopL/5 |
0.91 |
90.61 |
| TopL/2 |
0.77 |
81.02 |
Note: The linear model (Average probability vs Predicted precision) was trained on CASP14 dataset
|
Predicted Top 1 Tertiary structure
|
|
|
| Long-Range |
Precision |
| TopL/5 |
100.00 |
| TopL/2 |
94.41 |
| TopL |
68.94 |
| Top2L |
41.15 |
| Alignment |
Number |
| N |
2558 |
| Neff |
498 |
|
Model comparsion
| Model |
TM-score |
| Model 2 |
0.9588 |
| Model 3 |
0.9581 |
| Model 4 |
0.8284 |
| Model 5 |
0.8253 |
| Average |
0.89265 |
Radius Gyration
|
Similar pdbs
| PDB |
TM-score |
| 2zlf |
0.45404 |
| 3s8c |
0.45312 |
| 4x3v |
0.45239 |
| 1zyz |
0.45183 |
| 2cvx |
0.45162 |
|
Note: The model is built by ab initio method, no significant templates are found!
|
Predicted Top 2 Tertiary structure
|
|
|
| Long-Range |
Precision |
| TopL/5 |
100.00 |
| TopL/2 |
95.65 |
| TopL |
69.57 |
| Top2L |
42.08 |
| Alignment |
Number |
| N |
2558 |
| Neff |
498 |
|
Model comparsion
| Model |
TM-score |
| Model 1 |
0.9588 |
| Model 3 |
0.9764 |
| Model 4 |
0.8189 |
| Model 5 |
0.8154 |
| Average |
0.89238 |
Radius Gyration
|
Similar pdbs
| PDB |
TM-score |
| 3s8c |
0.44997 |
| 2zlf |
0.44981 |
| 5im3 |
0.44904 |
| 1zyz |
0.44862 |
| 3s87 |
0.44838 |
|
Note: The model is built by ab initio method, no significant templates are found!
|
Predicted Top 3 Tertiary structure
|
|
|
| Long-Range |
Precision |
| TopL/5 |
100.00 |
| TopL/2 |
95.65 |
| TopL |
69.88 |
| Top2L |
42.24 |
| Alignment |
Number |
| N |
2558 |
| Neff |
498 |
|
Model comparsion
| Model |
TM-score |
| Model 1 |
0.9581 |
| Model 2 |
0.9764 |
| Model 4 |
0.8147 |
| Model 5 |
0.8114 |
| Average |
0.89015 |
Radius Gyration
|
Similar pdbs
| PDB |
TM-score |
| 3s8c |
0.45298 |
| 2zlf |
0.45207 |
| 1zyz |
0.45165 |
| 2cvx |
0.44985 |
| 5im3 |
0.44949 |
|
Note: The model is built by ab initio method, no significant templates are found!
|
Predicted Top 4 Tertiary structure
|
|
|
| Long-Range |
Precision |
| TopL/5 |
100.00 |
| TopL/2 |
95.03 |
| TopL |
62.42 |
| Top2L |
33.54 |
| Alignment |
Number |
| N |
2558 |
| Neff |
498 |
|
Model comparsion
| Model |
TM-score |
| Model 1 |
0.8284 |
| Model 2 |
0.8189 |
| Model 3 |
0.8147 |
| Model 5 |
0.9489 |
| Average |
0.85272 |
Radius Gyration
|
Similar pdbs
| PDB |
TM-score |
| 2zlf |
0.45728 |
| 2wgh |
0.45651 |
| 5im3 |
0.45421 |
| 6aui |
0.45396 |
| 2cvx |
0.45378 |
|
Note: The model is built by ab initio method, no significant templates are found!
|
Predicted Top 5 Tertiary structure
|
|
|
| Long-Range |
Precision |
| TopL/5 |
100.00 |
| TopL/2 |
95.65 |
| TopL |
62.42 |
| Top2L |
33.23 |
| Alignment |
Number |
| N |
2558 |
| Neff |
498 |
|
Model comparsion
| Model |
TM-score |
| Model 1 |
0.8253 |
| Model 2 |
0.8154 |
| Model 3 |
0.8114 |
| Model 4 |
0.9489 |
| Average |
0.85025 |
Radius Gyration
|
Similar pdbs
| PDB |
TM-score |
| 2zlf |
0.46298 |
| 3s8c |
0.46236 |
| 1zyz |
0.46224 |
| 2zlg |
0.46089 |
| 4x3v |
0.46063 |
|
Note: The model is built by ab initio method, no significant templates are found!
|
References
[1] Hou, J., Wu, T., Cao, R., & Cheng, J. (2019). Protein tertiary structure modeling driven by deep learning and contact distance prediction in CASP13. bioRxiv, 552422.
[2] Li, J., Deng, X., Eickholt, J., & Cheng, J. (2013). Designing and benchmarking the MULTICOM protein structure prediction system. BMC structural biology, 13(1), 2.
[3] Cheng, J., Li, J., Wang, Z., Eickholt, J., & Deng, X. (2012). The MULTICOM toolbox for protein structure prediction. BMC bioinformatics, 13(1), 65.
[4] Wang, Z., Eickholt, J., & Cheng, J. (2010). MULTICOM: a multi-level combination approach to protein structure prediction and its assessments in CASP8. Bioinformatics, 26(7), 882-888.
