A0A0H3C491
multicom
A0A0H3C491
full_length
A0A0H3C491
Results of Structure Prediction for Target Name: A0A0H3C491 ( Click 
)
Domain Boundary prediction ( View )
>A0A0H3C491: 1-237
| 1-60: |
M | K | P | L | R | S | P | W | V | M | R | A | L | A | R | F | F | S | G | Y | I | A | L | T | Y | K | T | L | R | W | T | R | E | G | Q | A | I | A | D | R | V | Q | A | E | A | L | A | S | G | G | G | A | I | L | A | L | W | H | S | R |
| 61-119: |
V | P | V | G | P | A | T | W | P | Q | G | P | D | K | P | E | I | R | V | L | V | S | Q | S | R | D | G | E | F | I | A | R | V | I | A | R | L | G | L | P | S | I | R | G | S | S | L | K | K | T | D | T | A | K | N | K | G | G | E | Q |
| 121-179: |
A | F | R | D | M | V | K | W | V | K | D | G | G | A | M | A | I | T | P | D | G | P | R | G | P | V | E | V | M | Q | K | G | A | V | A | L | A | R | V | S | G | A | P | V | L | F | V | G | V | A | V | N | P | C | I | R | L | K | T | W |
| 181-237: |
D | R | T | I | I | P | L | P | F | A | K | A | A | M | V | W | D | G | P | V | H | A | G | R | D | D | D | P | D | A | V | V | E | A | W | G | A | R | L | S | A | V | S | R | R | A | E | A | I | V | G | E | T | P | P | K | D |
| 1-60: |
C | C | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | C | E | E | E | E | C | C | C | C | C | H | H | H | H | H | H | H | H | H | C | C | C | C | C | E | E | E | E | E | E | H | H | H |
| 61-119: |
H | H | H | H | H | H | H | H | H | C | C | C | C | C | C | C | E | E | E | E | E | E | C | C | C | C | H | H | H | H | H | H | H | H | H | H | C | C | C | E | E | E | E | C | C | C | C | C | C | C | C | C | C | C | C | C | C | H | H | H |
| 121-179: |
H | H | H | H | H | H | H | H | H | H | C | C | C | E | E | E | E | E | C | C | C | C | C | C | C | C | C | C | C | C | C | H | H | H | H | H | H | H | H | C | C | C | C | E | E | E | E | E | E | E | C | C | C | E | E | E | E | C | C | C |
| 181-237: |
C | C | E | E | C | C | C | C | C | C | E | E | E | E | E | E | C | C | C | C | E | C | C | C | C | C | C | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | H | C | C | C | C | C | C | C |
| |
| | H(Helix): 100(42.19%) | E(Strand): 45(18.99%) | C(Coil): 92(38.82%) |
| 1-60: |
E | E | E | B | E | E | E | B | B | B | E | B | B | B | B | B | B | B | B | B | B | B | B | B | B | B | B | B | E | B | E | B | E | E | E | E | E | B | E | E | B | E | E | E | E | B | E | E | E | E | B | B | B | B | B | B | B | B | B | B |
| 61-119: |
B | B | B | B | B | B | B | B | E | E | B | E | E | E | E | E | B | B | B | B | B | B | E | B | E | E | B | E | B | B | B | B | B | B | E | E | B | E | B | E | B | B | B | B | B | B | E | E | E | E | E | E | E | E | E | E | E | B | B | E |
| 121-179: |
B | B | B | E | B | B | E | B | B | E | E | E | E | B | B | B | B | B | B | B | B | E | E | B | E | E | B | E | B | E | E | B | B | B | B | B | B | E | E | B | E | B | B | B | B | B | B | B | B | B | B | E | E | B | B | E | B | E | B | B |
| 181-237: |
B | E | B | E | B | B | B | B | B | B | E | B | B | B | B | B | B | E | B | B | E | B | E | E | E | E | E | E | E | E | B | B | E | E | B | E | E | B | B | E | E | B | B | E | E | B | E | E | B | B | E | E | E | E | E | E | E |
| |
| | e(Exposed): 101(42.62%) | b(Buried): 136(57.38%) |
| 1-60: |
T | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N |
| 61-119: |
N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | T | T | T | T | T | T | T | N | N | N | N | N | N |
| 121-179: |
N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N |
| 181-237: |
N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | T | T |
| |
| | N(Normal): 227(95.78%) | T(Disorder): 10(4.22%) |
Predicted contact map and distance map
|
Predicted distance map
|
|
Predicted contact map
|
Probability to Precision
| Long-Range |
Average probability |
Predicted precision |
| TopL/5 |
0.96 |
95.07 |
| TopL/2 |
0.90 |
94.20 |
Note: The linear model (Average probability vs Predicted precision) was trained on CASP14 dataset
|
Predicted Top 1 Tertiary structure
|
|
|
| Long-Range |
Precision |
| TopL/5 |
89.36 |
| TopL/2 |
95.80 |
| TopL |
91.14 |
| Top2L |
58.02 |
| Alignment |
Number |
| N |
44181 |
| Neff |
11113 |
|
Model comparsion
| Model |
TM-score |
| Model 2 |
0.9728 |
| Model 3 |
0.9774 |
| Model 4 |
0.9713 |
| Model 5 |
0.9663 |
| Average |
0.97195 |
Radius Gyration
|
Similar pdbs
| PDB |
TM-score |
| 1k30 |
0.74571 |
| 1iuq |
0.73565 |
| 5kym |
0.66405 |
| 5f31 |
0.58368 |
| 5f2t |
0.58368 |
|
Note: The model is built by ab initio method, no significant templates are found!
|
Predicted Top 2 Tertiary structure
|
|
|
| Long-Range |
Precision |
| TopL/5 |
89.36 |
| TopL/2 |
94.96 |
| TopL |
90.72 |
| Top2L |
58.65 |
| Alignment |
Number |
| N |
44181 |
| Neff |
11113 |
|
Model comparsion
| Model |
TM-score |
| Model 1 |
0.9728 |
| Model 3 |
0.9793 |
| Model 4 |
0.9747 |
| Model 5 |
0.9693 |
| Average |
0.97403 |
Radius Gyration
|
Similar pdbs
| PDB |
TM-score |
| 1k30 |
0.74106 |
| 1iuq |
0.72887 |
| 5kym |
0.66374 |
| 5f31 |
0.58700 |
| 5f2t |
0.58682 |
|
Note: The model is built by ab initio method, no significant templates are found!
|
Predicted Top 3 Tertiary structure
|
|
|
| Long-Range |
Precision |
| TopL/5 |
87.23 |
| TopL/2 |
94.96 |
| TopL |
90.72 |
| Top2L |
58.65 |
| Alignment |
Number |
| N |
44181 |
| Neff |
11113 |
|
Model comparsion
| Model |
TM-score |
| Model 1 |
0.9774 |
| Model 2 |
0.9793 |
| Model 4 |
0.9740 |
| Model 5 |
0.9653 |
| Average |
0.97400 |
Radius Gyration
|
Similar pdbs
| PDB |
TM-score |
| 1k30 |
0.74175 |
| 1iuq |
0.73168 |
| 5kym |
0.66467 |
| 5f31 |
0.58559 |
| 5f2t |
0.58534 |
|
Note: The model is built by ab initio method, no significant templates are found!
|
Predicted Top 4 Tertiary structure
|
|
|
| Long-Range |
Precision |
| TopL/5 |
89.36 |
| TopL/2 |
95.80 |
| TopL |
91.14 |
| Top2L |
59.07 |
| Alignment |
Number |
| N |
44181 |
| Neff |
11113 |
|
Model comparsion
| Model |
TM-score |
| Model 1 |
0.9713 |
| Model 2 |
0.9747 |
| Model 3 |
0.9740 |
| Model 5 |
0.9806 |
| Average |
0.97515 |
Radius Gyration
|
Similar pdbs
| PDB |
TM-score |
| 1k30 |
0.74560 |
| 1iuq |
0.73634 |
| 5kym |
0.66504 |
| 5f31 |
0.58187 |
| 5f2t |
0.58110 |
|
Note: The model is built by ab initio method, no significant templates are found!
|
Predicted Top 5 Tertiary structure
|
|
|
| Long-Range |
Precision |
| TopL/5 |
89.36 |
| TopL/2 |
95.80 |
| TopL |
92.83 |
| Top2L |
60.55 |
| Alignment |
Number |
| N |
44181 |
| Neff |
11113 |
|
Model comparsion
| Model |
TM-score |
| Model 1 |
0.9663 |
| Model 2 |
0.9693 |
| Model 3 |
0.9653 |
| Model 4 |
0.9806 |
| Average |
0.97037 |
Radius Gyration
|
Similar pdbs
| PDB |
TM-score |
| 1k30 |
0.74234 |
| 1iuq |
0.73477 |
| 5kym |
0.66797 |
| 5f2t |
0.58413 |
| 5f31 |
0.58405 |
|
Note: The model is built by ab initio method, no significant templates are found!
|
References
[1] Hou, J., Wu, T., Cao, R., & Cheng, J. (2019). Protein tertiary structure modeling driven by deep learning and contact distance prediction in CASP13. bioRxiv, 552422.
[2] Li, J., Deng, X., Eickholt, J., & Cheng, J. (2013). Designing and benchmarking the MULTICOM protein structure prediction system. BMC structural biology, 13(1), 2.
[3] Cheng, J., Li, J., Wang, Z., Eickholt, J., & Deng, X. (2012). The MULTICOM toolbox for protein structure prediction. BMC bioinformatics, 13(1), 65.
[4] Wang, Z., Eickholt, J., & Cheng, J. (2010). MULTICOM: a multi-level combination approach to protein structure prediction and its assessments in CASP8. Bioinformatics, 26(7), 882-888.
