Protein sequence

>A0A0H3C7Y4: 1-177

1-60:

M

S

D

Q

S

Q

E

P

T

M

E

I

L

A

S

I

R

I

S

E

D

A

P

A

E

P

A

E

A

P

E

P

E

P

E

P

V

S

F

D

E

V

L

E

L

T

D

P

I

61-119:

A

P

E

P

E

L

P

L

E

T

V

G

D

I

D

V

Y

S

P

E

P

E

S

E

P

A

Y

T

P

A

P

V

F

D

R

D

E

V

A

E

Q

L

V

G

V

S

A

S

A

S

A

F

121-177:

G

S

L

S

A

L

M

P

K

D

G

R

T

L

E

D

V

R

E

L

R

P

L

K

E

W

L

D

Q

N

L

P

R

I

V

E

T

K

V

E

V

Q

R

I

S

R

G

R

G

A

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60:

C

H

C

H

C

61-119:

C

H

C

H

121-177:

H

C

H

C

H

C

H(Helix): 71(40.11%)

E(Strand): 0(0%)

C(Coil): 106(59.89%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

61-119:

E

B

E

B

E

B

E

B

121-177:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

e(Exposed): 134(75.71%)

b(Buried): 43(24.29%)

Disorder prediction (N: Normal T: Disorder)

1-60:

T

N

T

61-119:

T

N

T

N

121-177:

N

T

N(Normal): 81(45.76%)

T(Disorder): 96(54.24%)

Predicted contact map and distance map

Predicted distance map

Predicted contact map

Probability to Precision

Long-Range	Average probability	Predicted precision
TopL/5	0.18	21.17
TopL/2	0.13	15.67

Note: The linear model (Average probability vs Predicted precision) was trained on CASP14 dataset

Predicted Top 1 Tertiary structure

Predicted Model 1

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d1"[x]

Model 1 vs Contact (Top L/5)

./work/multicom-A0A0H3C7Y4/full_length/casp1_contact/L5_long.png

Model 1 vs Contact (Top L/2)

./work/multicom-A0A0H3C7Y4/full_length/casp1_contact/L2_long.png

Model 1 vs Contact (Top L)

./work/multicom-A0A0H3C7Y4/full_length/casp1_contact/L_long.png

Model 1 vs Contact (Top 2L)

./work/multicom-A0A0H3C7Y4/full_length/casp1_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	37.14
TopL/2	16.85
TopL	10.17
Top2L	6.78

( Alignment file )

Alignment	Number
N	1313
Neff	499

Model comparsion

Model	TM-score
Model 2	0.4006
Model 3	0.3846
Model 4	0.5155
Model 5	0.2100
Average	0.37767

Radius Gyration

RG	RG/(2.0*L^0.4)
19.14	1.20978

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
5a29	0.47889
1wpx	0.47621
1ac5	0.47330
1ivy	0.47292
4cia	0.47232

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 2 Tertiary structure

Predicted Model 2

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d2"[x]

Model 2 vs Contact (Top L/5)

./work/multicom-A0A0H3C7Y4/full_length/casp2_contact/L5_long.png

Model 2 vs Contact (Top L/2)

./work/multicom-A0A0H3C7Y4/full_length/casp2_contact/L2_long.png

Model 2 vs Contact (Top L)

./work/multicom-A0A0H3C7Y4/full_length/casp2_contact/L_long.png

Model 2 vs Contact (Top 2L)

./work/multicom-A0A0H3C7Y4/full_length/casp2_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	14.29
TopL/2	8.99
TopL	6.78
Top2L	5.08

( Alignment file )

Alignment	Number
N	1313
Neff	499

Model comparsion

Model	TM-score
Model 1	0.4006
Model 3	0.6914
Model 4	0.4498
Model 5	0.2121
Average	0.43848

Radius Gyration

RG	RG/(2.0*L^0.4)
18.62	1.17691

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
5doq	0.45986
5ir6	0.45964
6a2j	0.45616
6ied	0.45445
3mkk	0.44919

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 3 Tertiary structure

Predicted Model 3

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d3"[x]

Model 3 vs Contact (Top L/5)

./work/multicom-A0A0H3C7Y4/full_length/casp3_contact/L5_long.png

Model 3 vs Contact (Top L/2)

./work/multicom-A0A0H3C7Y4/full_length/casp3_contact/L2_long.png

Model 3 vs Contact (Top L)

./work/multicom-A0A0H3C7Y4/full_length/casp3_contact/L_long.png

Model 3 vs Contact (Top 2L)

./work/multicom-A0A0H3C7Y4/full_length/casp3_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	14.29
TopL/2	10.11
TopL	7.34
Top2L	4.80

( Alignment file )

Alignment	Number
N	1313
Neff	499

Model comparsion

Model	TM-score
Model 1	0.3846
Model 2	0.6914
Model 4	0.4672
Model 5	0.1926
Average	0.43395

Radius Gyration

RG	RG/(2.0*L^0.4)
18.51	1.16996

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
5ubl	0.47400
5ubk	0.47029
6hzf	0.46116
4euf	0.45696
5amr	0.45080

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 4 Tertiary structure

Predicted Model 4

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d4"[x]

Model 4 vs Contact (Top L/5)

./work/multicom-A0A0H3C7Y4/full_length/casp4_contact/L5_long.png

Model 4 vs Contact (Top L/2)

./work/multicom-A0A0H3C7Y4/full_length/casp4_contact/L2_long.png

Model 4 vs Contact (Top L)

./work/multicom-A0A0H3C7Y4/full_length/casp4_contact/L_long.png

Model 4 vs Contact (Top 2L)

./work/multicom-A0A0H3C7Y4/full_length/casp4_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	28.57
TopL/2	13.48
TopL	9.04
Top2L	5.08

( Alignment file )

Alignment	Number
N	1313
Neff	499

Model comparsion

Model	TM-score
Model 1	0.5155
Model 2	0.4498
Model 3	0.4672
Model 5	0.2162
Average	0.41217

Radius Gyration

RG	RG/(2.0*L^0.4)
18.61	1.17628

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
5lzq	0.52454
6qxa	0.52227
4av6	0.51668
5ttp	0.47822
3cnf	0.47752

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 5 Tertiary structure

Predicted Model 5

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d5"[x]

Model 5 vs Contact (Top L/5)

./work/multicom-A0A0H3C7Y4/full_length/casp5_contact/L5_long.png

Model 5 vs Contact (Top L/2)

./work/multicom-A0A0H3C7Y4/full_length/casp5_contact/L2_long.png

Model 5 vs Contact (Top L)

./work/multicom-A0A0H3C7Y4/full_length/casp5_contact/L_long.png

Model 5 vs Contact (Top 2L)

./work/multicom-A0A0H3C7Y4/full_length/casp5_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	0.00
TopL/2	1.12
TopL	1.13
Top2L	1.69

( Alignment file )

Alignment	Number
N	1313
Neff	499

Model comparsion

Model	TM-score
Model 1	0.2100
Model 2	0.2121
Model 3	0.1926
Model 4	0.2162
Average	0.20772

Radius Gyration

RG	RG/(2.0*L^0.4)
18.45	1.16617

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
4hxz	0.74160
4hym	0.73853
4hy1	0.73806
1s16	0.73553
4kqv	0.71592

>A0A0H3C7Y4 MSDQSQE-------------------------PTMEEILASI------------------------RRIISEDDAPAEPAAE-AAPPP----P-----------------PEPEPEP--VS----------FDDEVLELTDPIAPEPEL--PPL--ETV--GDIDV--YS--PPEP-ESE-PAYTPPPAAPVF--DRDEVAEQLVGVSA---A-----SAAASAFGSLSSALL----MP---------KDGRTLEDVVRELLRPLLKEWLDQNLPRIVETKVEEEVQRISRGRGA* >4HY1A|pos:71-360 IHPEHKMSGIELIMTKLHSGGKFSNGGLHGVGVSVVNALSTRLEAEIKRDGNVYHIVFEDGFKTKDLEIIDNVGKKNTGTKIRFWPNKKYFDDIKVNFKALKNLLEAKAILCKALTIKYSNEIKKEKLTWHFETGLKGYLDHKLEAETLPAEPFIIDNFSNGDSYLDAVFCWCEDPSESIKNSYVNLIPTPQDGTHVTGLKNGIYDAIKAYIEKNSIKITANDSFAQLNYVISVKITNPQFAGQTKEKLSNKDVTNFVATAVKDLLTIWLNQN-PDEARQIVENISKVA----QK*

( Image Alignment )

Domain Boundary prediction ( View )

Protein sequence

Secondary structure prediction (H: Helix E: Strand C: Coil)

Solvent accessibility prediction (e: Exposed b: Buried)

Disorder prediction (N: Normal T: Disorder)

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

References

Domain Boundary prediction ( View )

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

References

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )