Protein sequence

>A0Q5X5: 1-222

1-60:

M

S

Y

K

V

K

I

Y

R

D

V

A

N

L

K

I

S

L

N

K

D

G

L

V

T

V

S

P

Q

K

V

T

K

E

I

F

K

I

L

E

S

K

A

W

L

D

K

H

A

K

R

L

S

V

N

Q

61-119:

K

Y

D

Y

Q

N

Y

T

L

N

D

G

D

S

V

Y

F

L

G

R

E

Y

P

I

K

L

V

E

S

K

H

N

I

V

N

Y

H

D

H

I

Q

I

L

N

P

S

V

I

T

N

R

Q

F

K

L

Q

L

121-179:

E

F

Y

K

D

Q

A

D

I

L

N

L

V

A

K

Y

L

K

I

T

N

Q

E

I

T

R

V

T

I

K

T

K

T

R

W

G

S

C

N

Y

V

K

T

I

N

L

N

F

N

L

V

L

R

D

I

181-222:

Q

A

I

E

Y

V

L

H

E

I

A

H

L

T

H

P

N

H

S

K

E

F

Y

A

Y

V

A

S

Y

M

P

D

W

K

V

R

E

K

R

L

K

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60:

C

E

C

E

C

E

C

H

C

61-119:

C

E

C

E

C

E

C

E

C

H

121-179:

H

C

E

C

E

H

C

H

181-222:

H

E

H

C

H

C

H

C

H(Helix): 90(40.54%)

E(Strand): 56(25.23%)

C(Coil): 76(34.23%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

61-119:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

121-179:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

181-222:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

e(Exposed): 128(57.66%)

b(Buried): 94(42.34%)

Disorder prediction (N: Normal T: Disorder)

1-60:

N

61-119:

N

121-179:

N

181-222:

N

N(Normal): 222(100%)

T(Disorder): 0(0%)

Predicted contact map and distance map

Predicted distance map

Predicted contact map

Probability to Precision

Long-Range	Average probability	Predicted precision
TopL/5	0.85	85.28
TopL/2	0.68	71.65

Note: The linear model (Average probability vs Predicted precision) was trained on CASP14 dataset

Predicted Top 1 Tertiary structure

Predicted Model 1

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d1"[x]

Model 1 vs Contact (Top L/5)

./work/multicom-A0Q5X5/full_length/casp1_contact/L5_long.png

Model 1 vs Contact (Top L/2)

./work/multicom-A0Q5X5/full_length/casp1_contact/L2_long.png

Model 1 vs Contact (Top L)

./work/multicom-A0Q5X5/full_length/casp1_contact/L_long.png

Model 1 vs Contact (Top 2L)

./work/multicom-A0Q5X5/full_length/casp1_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	86.36
TopL/2	74.77
TopL	46.40
Top2L	24.77

( Alignment file )

Alignment	Number
N	4702
Neff	2731

Model comparsion

Model	TM-score
Model 2	0.6479
Model 3	0.5117
Model 4	0.5580
Model 5	0.5469
Average	0.56613

Radius Gyration

RG	RG/(2.0*L^0.4)
23.20	1.33875

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
1pwu	0.46590
5d1s	0.46442
1yqy	0.46320
4dv8	0.46317
4pkq	0.46154

Note: This is multi-domain structure, check alignments and domain qualities in individual domains!

Predicted Top 2 Tertiary structure

Predicted Model 2

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d2"[x]

Model 2 vs Contact (Top L/5)

./work/multicom-A0Q5X5/full_length/casp2_contact/L5_long.png

Model 2 vs Contact (Top L/2)

./work/multicom-A0Q5X5/full_length/casp2_contact/L2_long.png

Model 2 vs Contact (Top L)

./work/multicom-A0Q5X5/full_length/casp2_contact/L_long.png

Model 2 vs Contact (Top 2L)

./work/multicom-A0Q5X5/full_length/casp2_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	86.36
TopL/2	74.77
TopL	47.30
Top2L	25.00

( Alignment file )

Alignment	Number
N	4702
Neff	2731

Model comparsion

Model	TM-score
Model 1	0.6479
Model 3	0.4810
Model 4	0.7564
Model 5	0.4952
Average	0.59513

Radius Gyration

RG	RG/(2.0*L^0.4)
21.89	1.26316

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
1fgh	0.47570
1ami	0.47463
1aco	0.47371
5acn	0.47353
1nit	0.47313

Note: This is multi-domain structure, check alignments and domain qualities in individual domains!

Predicted Top 3 Tertiary structure

Predicted Model 3

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d3"[x]

Model 3 vs Contact (Top L/5)

./work/multicom-A0Q5X5/full_length/casp3_contact/L5_long.png

Model 3 vs Contact (Top L/2)

./work/multicom-A0Q5X5/full_length/casp3_contact/L2_long.png

Model 3 vs Contact (Top L)

./work/multicom-A0Q5X5/full_length/casp3_contact/L_long.png

Model 3 vs Contact (Top 2L)

./work/multicom-A0Q5X5/full_length/casp3_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	88.64
TopL/2	72.07
TopL	43.69
Top2L	22.07

( Alignment file )

Alignment	Number
N	4702
Neff	2731

Model comparsion

Model	TM-score
Model 1	0.5117
Model 2	0.4810
Model 4	0.4614
Model 5	0.7814
Average	0.55888

Radius Gyration

RG	RG/(2.0*L^0.4)
18.58	1.07216

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
4pkt	0.48674
4pkv	0.48656
4dv8	0.48371
4wf6	0.48306
4pkq	0.48295

Note: This is multi-domain structure, check alignments and domain qualities in individual domains!

Predicted Top 4 Tertiary structure

Predicted Model 4

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d4"[x]

Model 4 vs Contact (Top L/5)

./work/multicom-A0Q5X5/full_length/casp4_contact/L5_long.png

Model 4 vs Contact (Top L/2)

./work/multicom-A0Q5X5/full_length/casp4_contact/L2_long.png

Model 4 vs Contact (Top L)

./work/multicom-A0Q5X5/full_length/casp4_contact/L_long.png

Model 4 vs Contact (Top 2L)

./work/multicom-A0Q5X5/full_length/casp4_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	79.55
TopL/2	71.17
TopL	44.14
Top2L	22.75

( Alignment file )

Alignment	Number
N	4702
Neff	2731

Model comparsion

Model	TM-score
Model 1	0.5580
Model 2	0.7564
Model 3	0.4614
Model 5	0.4641
Average	0.55998

Radius Gyration

RG	RG/(2.0*L^0.4)
22.47	1.29663

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
3umm	0.47316
3ujn	0.47121
6jta	0.46806
4l78	0.46643
1b0m	0.45355

Note: This is multi-domain structure, check alignments and domain qualities in individual domains!

Predicted Top 5 Tertiary structure

Predicted Model 5

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d5"[x]

Model 5 vs Contact (Top L/5)

./work/multicom-A0Q5X5/full_length/casp5_contact/L5_long.png

Model 5 vs Contact (Top L/2)

./work/multicom-A0Q5X5/full_length/casp5_contact/L2_long.png

Model 5 vs Contact (Top L)

./work/multicom-A0Q5X5/full_length/casp5_contact/L_long.png

Model 5 vs Contact (Top 2L)

./work/multicom-A0Q5X5/full_length/casp5_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	90.91
TopL/2	74.77
TopL	45.50
Top2L	23.42

( Alignment file )

Alignment	Number
N	4702
Neff	2731

Model comparsion

Model	TM-score
Model 1	0.5469
Model 2	0.4952
Model 3	0.7814
Model 4	0.4641
Average	0.57190

Radius Gyration

RG	RG/(2.0*L^0.4)
18.26	1.05369

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
4pkv	0.47764
4pkq	0.47746
4dv8	0.47705
1yqy	0.47651
5d1s	0.47636

Note: This is multi-domain structure, check alignments and domain qualities in individual domains!

Domain Boundary prediction ( View )

Protein sequence

Secondary structure prediction (H: Helix E: Strand C: Coil)

Solvent accessibility prediction (e: Exposed b: Buried)

Disorder prediction (N: Normal T: Disorder)

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

References

Domain Boundary prediction ( View )

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

References

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )