Protein sequence

>A0Q7C4: 1-182

1-60:

M

G

K

V

I

D

L

D

E

I

D

R

L

E

R

E

N

S

Y

K

T

V

K

S

K

T

S

V

K

D

A

L

E

I

T

D

F

G

R

S

L

T

E

L

S

K

E

Q

L

E

K

I

P

I

D

61-119:

N

L

K

N

I

T

A

K

S

L

H

K

I

A

L

K

R

Q

T

Q

F

I

G

K

L

R

K

T

D

N

L

D

E

I

Y

K

A

Y

D

V

L

V

N

K

D

K

Q

A

N

L

M

F

Q

R

L

E

N

121-179:

I

R

N

L

D

P

L

K

M

N

T

L

D

K

L

I

Q

E

F

P

D

L

D

I

Q

K

L

R

Q

L

I

R

N

H

K

E

V

E

K

N

T

N

K

S

F

R

E

I

F

K

L

R

G

L

181-182:

Y

V

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60:

C

E

C

H

C

H

C

H

61-119:

H

C

H

C

H

121-179:

H

C

H

C

H

C

H

C

H

181-182:

C

H(Helix): 131(71.98%)

E(Strand): 3(1.65%)

C(Coil): 48(26.37%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

61-119:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

121-179:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

181-182:

E

e(Exposed): 119(65.38%)

b(Buried): 63(34.62%)

Disorder prediction (N: Normal T: Disorder)

1-60:

T

N

61-119:

N

121-179:

N

181-182:

T

N

N(Normal): 158(86.81%)

T(Disorder): 24(13.19%)

Predicted contact map and distance map

Predicted distance map

Predicted contact map

Probability to Precision

Long-Range	Average probability	Predicted precision
TopL/5	0.89	88.20
TopL/2	0.68	71.76

Note: The linear model (Average probability vs Predicted precision) was trained on CASP14 dataset

Predicted Top 1 Tertiary structure

Predicted Model 1

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d1"[x]

Model 1 vs Contact (Top L/5)

./work/multicom-A0Q7C4/full_length/casp1_contact/L5_long.png

Model 1 vs Contact (Top L/2)

./work/multicom-A0Q7C4/full_length/casp1_contact/L2_long.png

Model 1 vs Contact (Top L)

./work/multicom-A0Q7C4/full_length/casp1_contact/L_long.png

Model 1 vs Contact (Top 2L)

./work/multicom-A0Q7C4/full_length/casp1_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	84.62
TopL	46.15
Top2L	23.90

( Alignment file )

Alignment	Number
N	3846
Neff	626

Model comparsion

Model	TM-score
Model 2	0.8392
Model 3	0.7997
Model 4	0.8341
Model 5	0.7972
Average	0.81755

Radius Gyration

RG	RG/(2.0*L^0.4)
25.66	1.60382

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
2p0t	0.60630
1gkj	0.54073
1b8f	0.53839
1eb4	0.53744
1gk2	0.53712

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 2 Tertiary structure

Predicted Model 2

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d2"[x]

Model 2 vs Contact (Top L/5)

./work/multicom-A0Q7C4/full_length/casp2_contact/L5_long.png

Model 2 vs Contact (Top L/2)

./work/multicom-A0Q7C4/full_length/casp2_contact/L2_long.png

Model 2 vs Contact (Top L)

./work/multicom-A0Q7C4/full_length/casp2_contact/L_long.png

Model 2 vs Contact (Top 2L)

./work/multicom-A0Q7C4/full_length/casp2_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	83.52
TopL	44.51
Top2L	23.35

( Alignment file )

Alignment	Number
N	3846
Neff	626

Model comparsion

Model	TM-score
Model 1	0.8392
Model 3	0.8281
Model 4	0.8729
Model 5	0.8622
Average	0.85060

Radius Gyration

RG	RG/(2.0*L^0.4)
26.52	1.65757

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
2p0t	0.66885
6at7	0.55426
6f6t	0.55078
1gkj	0.54933
1gk3	0.54641

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 3 Tertiary structure

Predicted Model 3

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d3"[x]

Model 3 vs Contact (Top L/5)

./work/multicom-A0Q7C4/full_length/casp3_contact/L5_long.png

Model 3 vs Contact (Top L/2)

./work/multicom-A0Q7C4/full_length/casp3_contact/L2_long.png

Model 3 vs Contact (Top L)

./work/multicom-A0Q7C4/full_length/casp3_contact/L_long.png

Model 3 vs Contact (Top 2L)

./work/multicom-A0Q7C4/full_length/casp3_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	81.32
TopL	43.41
Top2L	22.80

( Alignment file )

Alignment	Number
N	3846
Neff	626

Model comparsion

Model	TM-score
Model 1	0.7997
Model 2	0.8281
Model 4	0.7931
Model 5	0.7398
Average	0.79018

Radius Gyration

RG	RG/(2.0*L^0.4)
26.51	1.65695

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
2p0t	0.65879
3kdz	0.53487
5ltm	0.53394
2rjr	0.53341
2qve	0.53268

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 4 Tertiary structure

Predicted Model 4

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d4"[x]

Model 4 vs Contact (Top L/5)

./work/multicom-A0Q7C4/full_length/casp4_contact/L5_long.png

Model 4 vs Contact (Top L/2)

./work/multicom-A0Q7C4/full_length/casp4_contact/L2_long.png

Model 4 vs Contact (Top L)

./work/multicom-A0Q7C4/full_length/casp4_contact/L_long.png

Model 4 vs Contact (Top 2L)

./work/multicom-A0Q7C4/full_length/casp4_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	84.62
TopL	45.05
Top2L	23.35

( Alignment file )

Alignment	Number
N	3846
Neff	626

Model comparsion

Model	TM-score
Model 1	0.8341
Model 2	0.8729
Model 3	0.7931
Model 5	0.8931
Average	0.84830

Radius Gyration

RG	RG/(2.0*L^0.4)
25.53	1.59569

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
2p0t	0.63297
1gk2	0.54827
1b8f	0.54768
1eb4	0.54675
1gk3	0.54614

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 5 Tertiary structure

Predicted Model 5

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d5"[x]

Model 5 vs Contact (Top L/5)

./work/multicom-A0Q7C4/full_length/casp5_contact/L5_long.png

Model 5 vs Contact (Top L/2)

./work/multicom-A0Q7C4/full_length/casp5_contact/L2_long.png

Model 5 vs Contact (Top L)

./work/multicom-A0Q7C4/full_length/casp5_contact/L_long.png

Model 5 vs Contact (Top 2L)

./work/multicom-A0Q7C4/full_length/casp5_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	79.12
TopL	42.86
Top2L	21.98

( Alignment file )

Alignment	Number
N	3846
Neff	626

Model comparsion

Model	TM-score
Model 1	0.7972
Model 2	0.8622
Model 3	0.7398
Model 4	0.8931
Average	0.82308

Radius Gyration

RG	RG/(2.0*L^0.4)
25.60	1.60007

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
2p0t	0.61887
1gk2	0.58173
1eb4	0.57789
1gk3	0.57788
1b8f	0.57725

Note: The model is built by ab initio method, no significant templates are found!

Domain Boundary prediction ( View )

Protein sequence

Secondary structure prediction (H: Helix E: Strand C: Coil)

Solvent accessibility prediction (e: Exposed b: Buried)

Disorder prediction (N: Normal T: Disorder)

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

References

Domain Boundary prediction ( View )

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

References

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )