Protein sequence

>B2RHM7: 1-152

1-60:

M

I

D

R

E

Q

I

V

R

I

V

S

D

Y

L

S

T

G

E

T

F

L

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A

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H

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N

R

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C

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61-119:

R

D

L

E

D

Y

E

L

E

V

G

S

T

G

L

T

S

P

L

K

V

M

R

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W

E

N

C

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S

E

L

S

V

L

T

N

G

M

K

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A

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121-152:

R

M

V

K

P

E

G

A

K

R

K

P

E

T

Q

E

L

T

I

V

M

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Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60:

C

H

C

E

C

E

C

E

H

C

61-119:

C

E

C

H

C

E

C

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C

E

121-152:

E

C

E

H

E

C

H(Helix): 40(26.32%)

E(Strand): 60(39.47%)

C(Coil): 52(34.21%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

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B

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B

E

61-119:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

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B

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B

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B

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B

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B

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B

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B

E

121-152:

E

B

E

B

E

B

E

B

E

B

E

B

E

e(Exposed): 100(65.79%)

b(Buried): 52(34.21%)

Disorder prediction (N: Normal T: Disorder)

1-60:

T

N

61-119:

N

121-152:

N

N(Normal): 151(99.34%)

T(Disorder): 1(0.66%)

Predicted contact map and distance map

Predicted distance map

Predicted contact map

Probability to Precision

Long-Range	Average probability	Predicted precision
TopL/5	0.98	97.19
TopL/2	0.91	95.29

Note: The linear model (Average probability vs Predicted precision) was trained on CASP14 dataset

Predicted Top 1 Tertiary structure

Predicted Model 1

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d1"[x]

Model 1 vs Contact (Top L/5)

./work/multicom-B2RHM7/full_length/casp1_contact/L5_long.png

Model 1 vs Contact (Top L/2)

./work/multicom-B2RHM7/full_length/casp1_contact/L2_long.png

Model 1 vs Contact (Top L)

./work/multicom-B2RHM7/full_length/casp1_contact/L_long.png

Model 1 vs Contact (Top 2L)

./work/multicom-B2RHM7/full_length/casp1_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	96.67
TopL/2	96.05
TopL	74.34
Top2L	41.78

( Alignment file )

Alignment	Number
N	5677
Neff	1695

Model comparsion

Model	TM-score
Model 2	0.9867
Model 3	0.9799
Model 4	0.9828
Model 5	0.9794
Average	0.98220

Radius Gyration

RG	RG/(2.0*L^0.4)
18.91	1.27078

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
5gl6	0.57418
5iv7	0.53716
4v55	0.53165
4v54	0.53097
4v53	0.52875

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 2 Tertiary structure

Predicted Model 2

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d2"[x]

Model 2 vs Contact (Top L/5)

./work/multicom-B2RHM7/full_length/casp2_contact/L5_long.png

Model 2 vs Contact (Top L/2)

./work/multicom-B2RHM7/full_length/casp2_contact/L2_long.png

Model 2 vs Contact (Top L)

./work/multicom-B2RHM7/full_length/casp2_contact/L_long.png

Model 2 vs Contact (Top 2L)

./work/multicom-B2RHM7/full_length/casp2_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	96.67
TopL/2	96.05
TopL	73.68
Top2L	41.12

( Alignment file )

Alignment	Number
N	5677
Neff	1695

Model comparsion

Model	TM-score
Model 1	0.9867
Model 3	0.9790
Model 4	0.9809
Model 5	0.9864
Average	0.98325

Radius Gyration

RG	RG/(2.0*L^0.4)
18.99	1.27616

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
5gl6	0.57481
5iv5	0.53835
5iv7	0.53071
5yim	0.52906
4v55	0.52863

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 3 Tertiary structure

Predicted Model 3

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d3"[x]

Model 3 vs Contact (Top L/5)

./work/multicom-B2RHM7/full_length/casp3_contact/L5_long.png

Model 3 vs Contact (Top L/2)

./work/multicom-B2RHM7/full_length/casp3_contact/L2_long.png

Model 3 vs Contact (Top L)

./work/multicom-B2RHM7/full_length/casp3_contact/L_long.png

Model 3 vs Contact (Top 2L)

./work/multicom-B2RHM7/full_length/casp3_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	96.67
TopL/2	96.05
TopL	74.34
Top2L	41.45

( Alignment file )

Alignment	Number
N	5677
Neff	1695

Model comparsion

Model	TM-score
Model 1	0.9799
Model 2	0.9790
Model 4	0.9847
Model 5	0.9831
Average	0.98167

Radius Gyration

RG	RG/(2.0*L^0.4)
18.75	1.26003

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
5gl6	0.57638
5iv7	0.53549
4v55	0.52899
4v54	0.52829
4v53	0.52620

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 4 Tertiary structure

Predicted Model 4

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d4"[x]

Model 4 vs Contact (Top L/5)

./work/multicom-B2RHM7/full_length/casp4_contact/L5_long.png

Model 4 vs Contact (Top L/2)

./work/multicom-B2RHM7/full_length/casp4_contact/L2_long.png

Model 4 vs Contact (Top L)

./work/multicom-B2RHM7/full_length/casp4_contact/L_long.png

Model 4 vs Contact (Top 2L)

./work/multicom-B2RHM7/full_length/casp4_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	96.67
TopL/2	94.74
TopL	76.32
Top2L	42.76

( Alignment file )

Alignment	Number
N	5677
Neff	1695

Model comparsion

Model	TM-score
Model 1	0.9828
Model 2	0.9809
Model 3	0.9847
Model 5	0.9834
Average	0.98295

Radius Gyration

RG	RG/(2.0*L^0.4)
18.70	1.25667

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
5gl6	0.57705
5iv7	0.53101
5zq6	0.52921
4v55	0.52869
4v54	0.52861

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 5 Tertiary structure

Predicted Model 5

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d5"[x]

Model 5 vs Contact (Top L/5)

./work/multicom-B2RHM7/full_length/casp5_contact/L5_long.png

Model 5 vs Contact (Top L/2)

./work/multicom-B2RHM7/full_length/casp5_contact/L2_long.png

Model 5 vs Contact (Top L)

./work/multicom-B2RHM7/full_length/casp5_contact/L_long.png

Model 5 vs Contact (Top 2L)

./work/multicom-B2RHM7/full_length/casp5_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	97.37
TopL	74.34
Top2L	41.12

( Alignment file )

Alignment	Number
N	5677
Neff	1695

Model comparsion

Model	TM-score
Model 1	0.9794
Model 2	0.9864
Model 3	0.9831
Model 4	0.9834
Average	0.98308

Radius Gyration

RG	RG/(2.0*L^0.4)
18.88	1.26877

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
5gl6	0.57350
5iv7	0.53552
4v55	0.52794
6b7o	0.52785
6b7m	0.52716

Note: The model is built by ab initio method, no significant templates are found!

Domain Boundary prediction ( View )

Protein sequence

Secondary structure prediction (H: Helix E: Strand C: Coil)

Solvent accessibility prediction (e: Exposed b: Buried)

Disorder prediction (N: Normal T: Disorder)

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

References

Domain Boundary prediction ( View )

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

References

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )