Protein sequence

>O25834: 1-183

1-60:

M

R

L

K

L

T

H

I

N

H

I

S

H

K

I

A

N

D

F

I

H

S

K

L

E

L

K

A

P

R

E

L

C

E

L

I

E

G

I

L

E

K

S

V

K

E

N

A

I

D

E

Q

A

R

E

L

61-119:

E

N

T

D

E

I

E

F

M

R

M

D

E

R

Q

L

F

W

M

I

K

R

Q

I

A

Q

K

E

G

F

H

L

F

W

E

R

C

N

D

L

S

H

Q

I

L

N

K

I

L

D

E

D

L

I

M

F

S

V

121-179:

S

E

N

L

I

R

N

L

I

Y

K

S

I

D

T

Y

S

K

A

Y

E

S

I

E

N

E

V

H

E

K

I

K

H

Y

K

R

K

L

P

V

G

S

D

E

Y

E

L

V

F

E

R

L

Y

E

L

R

K

181-183:

G

F

L

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60:

C

H

C

E

C

H

61-119:

H

C

H

C

E

C

H

C

E

C

121-179:

C

H

C

H

C

181-183:

C

H(Helix): 142(77.6%)

E(Strand): 6(3.28%)

C(Coil): 35(19.13%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

61-119:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

121-179:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

181-183:

E

e(Exposed): 102(55.74%)

b(Buried): 81(44.26%)

Disorder prediction (N: Normal T: Disorder)

1-60:

N

61-119:

N

121-179:

N

181-183:

N

N(Normal): 183(100%)

T(Disorder): 0(0%)

Predicted contact map and distance map

Predicted distance map

Predicted contact map

Probability to Precision

Long-Range	Average probability	Predicted precision
TopL/5	0.98	97.11
TopL/2	0.87	91.40

Note: The linear model (Average probability vs Predicted precision) was trained on CASP14 dataset

Predicted Top 1 Tertiary structure

Predicted Model 1

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d1"[x]

Model 1 vs Contact (Top L/5)

./work/multicom-O25834/full_length/casp1_contact/L5_long.png

Model 1 vs Contact (Top L/2)

./work/multicom-O25834/full_length/casp1_contact/L2_long.png

Model 1 vs Contact (Top L)

./work/multicom-O25834/full_length/casp1_contact/L_long.png

Model 1 vs Contact (Top 2L)

./work/multicom-O25834/full_length/casp1_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	97.83
TopL	65.03
Top2L	33.88

( Alignment file )

Alignment	Number
N	1025
Neff	134

Model comparsion

Model	TM-score
Model 2	0.9918
Model 3	0.8899
Model 4	0.8853
Model 5	0.8801
Average	0.91178

Radius Gyration

RG	RG/(2.0*L^0.4)
19.70	1.22859

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
3kd1	0.53619
3si6	0.53550
5gnq	0.53537
3suq	0.53510
4du3	0.53467

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 2 Tertiary structure

Predicted Model 2

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d2"[x]

Model 2 vs Contact (Top L/5)

./work/multicom-O25834/full_length/casp2_contact/L5_long.png

Model 2 vs Contact (Top L/2)

./work/multicom-O25834/full_length/casp2_contact/L2_long.png

Model 2 vs Contact (Top L)

./work/multicom-O25834/full_length/casp2_contact/L_long.png

Model 2 vs Contact (Top 2L)

./work/multicom-O25834/full_length/casp2_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	96.74
TopL	63.39
Top2L	33.06

( Alignment file )

Alignment	Number
N	1025
Neff	134

Model comparsion

Model	TM-score
Model 1	0.9918
Model 3	0.8860
Model 4	0.8841
Model 5	0.8719
Average	0.90845

Radius Gyration

RG	RG/(2.0*L^0.4)
19.76	1.23233

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
3uiq	0.53695
4du1	0.53624
4du3	0.53615
3kd1	0.53591
3qnn	0.53553

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 3 Tertiary structure

Predicted Model 3

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d3"[x]

Model 3 vs Contact (Top L/5)

./work/multicom-O25834/full_length/casp3_contact/L5_long.png

Model 3 vs Contact (Top L/2)

./work/multicom-O25834/full_length/casp3_contact/L2_long.png

Model 3 vs Contact (Top L)

./work/multicom-O25834/full_length/casp3_contact/L_long.png

Model 3 vs Contact (Top 2L)

./work/multicom-O25834/full_length/casp3_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	100.00
TopL	62.30
Top2L	31.15

( Alignment file )

Alignment	Number
N	1025
Neff	134

Model comparsion

Model	TM-score
Model 1	0.8899
Model 2	0.8860
Model 4	0.9914
Model 5	0.9764
Average	0.93593

Radius Gyration

RG	RG/(2.0*L^0.4)
20.19	1.25915

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
2i6w	0.55219
2w1b	0.55040
4u95	0.54793
4dx5	0.54787
4zit	0.54781

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 4 Tertiary structure

Predicted Model 4

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d4"[x]

Model 4 vs Contact (Top L/5)

./work/multicom-O25834/full_length/casp4_contact/L5_long.png

Model 4 vs Contact (Top L/2)

./work/multicom-O25834/full_length/casp4_contact/L2_long.png

Model 4 vs Contact (Top L)

./work/multicom-O25834/full_length/casp4_contact/L_long.png

Model 4 vs Contact (Top 2L)

./work/multicom-O25834/full_length/casp4_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	100.00
TopL	61.20
Top2L	30.60

( Alignment file )

Alignment	Number
N	1025
Neff	134

Model comparsion

Model	TM-score
Model 1	0.8853
Model 2	0.8841
Model 3	0.9914
Model 5	0.9735
Average	0.93358

Radius Gyration

RG	RG/(2.0*L^0.4)
20.25	1.26289

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
2w1b	0.54751
4zlj	0.54749
4u8y	0.54739
4dx5	0.54670
4zit	0.54664

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 5 Tertiary structure

Predicted Model 5

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d5"[x]

Model 5 vs Contact (Top L/5)

./work/multicom-O25834/full_length/casp5_contact/L5_long.png

Model 5 vs Contact (Top L/2)

./work/multicom-O25834/full_length/casp5_contact/L2_long.png

Model 5 vs Contact (Top L)

./work/multicom-O25834/full_length/casp5_contact/L_long.png

Model 5 vs Contact (Top 2L)

./work/multicom-O25834/full_length/casp5_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	100.00
TopL	63.39
Top2L	31.69

( Alignment file )

Alignment	Number
N	1025
Neff	134

Model comparsion

Model	TM-score
Model 1	0.8801
Model 2	0.8719
Model 3	0.9764
Model 4	0.9735
Average	0.92548

Radius Gyration

RG	RG/(2.0*L^0.4)
20.21	1.26040

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
2w1b	0.55333
4zit	0.55212
4zlj	0.55030
4ziv	0.54984
5yhf	0.54890

Note: The model is built by ab initio method, no significant templates are found!

Domain Boundary prediction ( View )

Protein sequence

Secondary structure prediction (H: Helix E: Strand C: Coil)

Solvent accessibility prediction (e: Exposed b: Buried)

Disorder prediction (N: Normal T: Disorder)

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

References

Domain Boundary prediction ( View )

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

References

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )