Results of Structure Prediction for Target Name: P01732 ( Click )

Domain Boundary prediction ( View )

./work/multicom-P01732/P01732.domain_info.marker.jpeg

Protein sequence

>P01732: 1-235
1-60: MALPVTALLLPLALLLHAARPSQFRVSPLDRTWNLGETVELKCQVLLSNPTSGCSWLFQP
61-119: RGAAASPTFLLYLSQNKPKAAEGLDTQRFSGKRLGDTFVLTLSDFRRENEGYYFCSALSN
121-179: SIMYFSHFVPVFLPAKPTTTPAPRPPTPAPTIASQPLSLRPEACRPAAGGAVHTRGLDFA
181-235: CDIYIWAPLAGTCGVLLLSLVITLYCNHRNRRRVCKCPRPVVKSGDKPSLSARYV

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60: CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEC
61-119: CCCCCCCEEEEEECCCCCEECCCCCCCCEEEEEECCEEEEEECCCCCCCCEEEEEEEEEC
121-179: CEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
181-235: EEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCC
H(Helix): 35(14.89%)E(Strand): 67(28.51%)C(Coil): 133(56.6%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60: EEEEBBBBBBBBBBBBEBEEEEEBEBEEEEEEBEEEEEBEBEBEBEBEEEEBBBBBBBBE
61-119: EEEEBEBEBBBBBBEEEEEBBEEBEEEBBEBEEEEEBBBBBBEEBBEEBBBEBBBBBBBE
121-179: BBBEBBEBBBBBBEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEBEEEEEEEEEEEEBEBB
181-235: BBBBBBBBBBBBBBBBBBBBBBBBBBBEEEEEEEBEBEEEEEEEEEEEEEEEEEE
e(Exposed): 130(55.32%)b(Buried): 105(44.68%)

Disorder prediction (N: Normal T: Disorder)

1-60: TTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
61-119: NNNNNNNNNNNNNNNNNTTNTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
121-179: NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNN
181-235: NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTT
N(Normal): 180(76.6%)T(Disorder): 55(23.4%)

Select domain

Predicted contact map and distance map

   

Predicted distance map

./work/contact_dist/P01732_d.jpg

   

Predicted contact map

./work/contact_dist/P01732_c.jpg

Predicted Top 1 Tertiary structure

   

Predicted Top 2 Tertiary structure

   

Predicted Top 3 Tertiary structure

   

Predicted Top 4 Tertiary structure

   

Predicted Top 5 Tertiary structure

   
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References

[1] Hou, J., Wu, T., Cao, R., & Cheng, J. (2019). Protein tertiary structure modeling driven by deep learning and contact distance prediction in CASP13. bioRxiv, 552422.
[2] Li, J., Deng, X., Eickholt, J., & Cheng, J. (2013). Designing and benchmarking the MULTICOM protein structure prediction system. BMC structural biology, 13(1), 2.
[3] Cheng, J., Li, J., Wang, Z., Eickholt, J., & Deng, X. (2012). The MULTICOM toolbox for protein structure prediction. BMC bioinformatics, 13(1), 65.
[4] Wang, Z., Eickholt, J., & Cheng, J. (2010). MULTICOM: a multi-level combination approach to protein structure prediction and its assessments in CASP8. Bioinformatics, 26(7), 882-888.