Protein sequence

>P44183: 1-436

1-60:

M

N

I

L

D

G

I

K

S

L

A

L

K

L

G

S

K

Q

D

Q

T

Y

A

R

G

L

S

L

T

D

L

M

Q

I

E

A

L

W

R

D

N

W

I

A

N

K

V

C

I

K

R

S

E

D

M

V

R

N

61-119:

W

R

D

I

F

S

N

D

L

K

S

E

Q

L

D

E

F

T

K

L

E

R

L

K

L

R

E

T

L

T

K

A

L

Q

W

S

L

Y

G

A

V

G

L

V

T

D

T

I

N

I

T

S

P

L

Q

P

121-179:

T

E

R

L

K

R

L

I

L

P

K

W

K

I

S

P

T

G

Q

R

D

V

F

S

P

N

F

G

R

Y

S

E

Y

T

I

T

G

T

Q

S

V

S

V

H

S

R

L

I

N

A

N

D

A

181-239:

P

L

S

D

N

D

I

W

G

V

S

D

L

E

K

I

D

V

L

K

R

F

D

S

A

S

A

N

V

G

D

L

I

F

E

S

K

I

D

I

F

K

I

A

G

L

S

D

K

I

S

A

G

L

E

N

D

V

A

241-299:

H

V

I

S

A

V

Q

S

I

K

S

A

T

N

S

L

D

A

E

N

E

Y

D

R

K

E

L

S

F

G

L

K

D

L

T

E

F

R

N

A

V

A

G

A

D

M

P

V

T

I

L

F

G

Q

S

301-359:

V

S

G

L

A

S

G

D

E

D

I

Q

N

Y

H

E

S

I

H

R

L

Q

E

T

R

L

R

P

V

L

E

V

L

D

T

L

C

N

E

L

F

G

Q

P

D

W

F

E

F

L

P

L

T

V

K

361-419:

Q

E

Q

V

N

M

L

N

T

F

A

T

A

N

T

L

I

Q

N

G

V

N

E

Y

Q

V

A

N

E

L

R

E

S

G

L

F

A

N

I

S

A

D

I

E

M

K

N

A

N

E

L

A

R

N

F

421-436:

E

P

E

G

E

S

T

Q

V

Q

A

S

E

D

E

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60:

C

H

C

H

C

H

C

H

C

H

C

H

C

61-119:

C

E

C

H

C

E

C

121-179:

C

E

C

E

C

E

C

E

C

E

C

181-239:

C

H

C

H

E

C

H

C

H

241-299:

H

C

E

C

E

C

H

C

E

C

301-359:

C

H

C

H

C

E

C

361-419:

H

C

H

C

H

C

421-436:

C

H(Helix): 195(44.72%)

E(Strand): 57(13.07%)

C(Coil): 184(42.2%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

61-119:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

121-179:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

181-239:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

241-299:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

301-359:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

361-419:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

421-436:

E

e(Exposed): 228(52.29%)

b(Buried): 208(47.71%)

Disorder prediction (N: Normal T: Disorder)

1-60:

T

N

61-119:

N

121-179:

N

181-239:

N

241-299:

N

301-359:

N

361-419:

N

T

421-436:

T

N(Normal): 396(90.83%)

T(Disorder): 40(9.17%)

Predicted contact map and distance map

Predicted distance map

Predicted contact map

Probability to Precision

Long-Range	Average probability	Predicted precision
TopL/5	0.90	89.93
TopL/2	0.76	80.13

Note: The linear model (Average probability vs Predicted precision) was trained on CASP14 dataset

Predicted Top 1 Tertiary structure

Predicted Model 1

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d1"[x]

Model 1 vs Contact (Top L/5)

./work/multicom-P44183/full_length/casp1_contact/L5_long.png

Model 1 vs Contact (Top L/2)

./work/multicom-P44183/full_length/casp1_contact/L2_long.png

Model 1 vs Contact (Top L)

./work/multicom-P44183/full_length/casp1_contact/L_long.png

Model 1 vs Contact (Top 2L)

./work/multicom-P44183/full_length/casp1_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	97.70
TopL/2	91.28
TopL	70.64
Top2L	43.00

( Alignment file )

Alignment	Number
N	5893
Neff	1289

Model comparsion

Model	TM-score
Model 2	0.8820
Model 3	0.9004
Model 4	0.8903
Model 5	0.9097
Average	0.89560

Radius Gyration

RG	RG/(2.0*L^0.4)
32.77	1.44228

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
4zjn	0.52802
6ibg	0.52691
5ngd	0.52661
6qjt	0.51761
3ja7	0.50530

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 2 Tertiary structure

Predicted Model 2

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d2"[x]

Model 2 vs Contact (Top L/5)

./work/multicom-P44183/full_length/casp2_contact/L5_long.png

Model 2 vs Contact (Top L/2)

./work/multicom-P44183/full_length/casp2_contact/L2_long.png

Model 2 vs Contact (Top L)

./work/multicom-P44183/full_length/casp2_contact/L_long.png

Model 2 vs Contact (Top 2L)

./work/multicom-P44183/full_length/casp2_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	98.85
TopL/2	92.20
TopL	71.56
Top2L	43.46

( Alignment file )

Alignment	Number
N	5893
Neff	1289

Model comparsion

Model	TM-score
Model 1	0.8820
Model 3	0.9301
Model 4	0.9170
Model 5	0.8717
Average	0.90020

Radius Gyration

RG	RG/(2.0*L^0.4)
32.60	1.43480

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
4zjn	0.52585
5ngd	0.52455
6ibg	0.52429
3ja7	0.51398
6qjt	0.51165

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 3 Tertiary structure

Predicted Model 3

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d3"[x]

Model 3 vs Contact (Top L/5)

./work/multicom-P44183/full_length/casp3_contact/L5_long.png

Model 3 vs Contact (Top L/2)

./work/multicom-P44183/full_length/casp3_contact/L2_long.png

Model 3 vs Contact (Top L)

./work/multicom-P44183/full_length/casp3_contact/L_long.png

Model 3 vs Contact (Top 2L)

./work/multicom-P44183/full_length/casp3_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	98.85
TopL/2	91.74
TopL	70.41
Top2L	42.43

( Alignment file )

Alignment	Number
N	5893
Neff	1289

Model comparsion

Model	TM-score
Model 1	0.9004
Model 2	0.9301
Model 4	0.8913
Model 5	0.8629
Average	0.89617

Radius Gyration

RG	RG/(2.0*L^0.4)
32.59	1.43436

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
4zjn	0.51921
5ngd	0.51867
6ibg	0.51560
3ja7	0.50749
6qjt	0.50648

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 4 Tertiary structure

Predicted Model 4

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d4"[x]

Model 4 vs Contact (Top L/5)

./work/multicom-P44183/full_length/casp4_contact/L5_long.png

Model 4 vs Contact (Top L/2)

./work/multicom-P44183/full_length/casp4_contact/L2_long.png

Model 4 vs Contact (Top L)

./work/multicom-P44183/full_length/casp4_contact/L_long.png

Model 4 vs Contact (Top 2L)

./work/multicom-P44183/full_length/casp4_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	98.85
TopL/2	90.83
TopL	70.41
Top2L	42.32

( Alignment file )

Alignment	Number
N	5893
Neff	1289

Model comparsion

Model	TM-score
Model 1	0.8903
Model 2	0.9170
Model 3	0.8913
Model 5	0.9183
Average	0.90422

Radius Gyration

RG	RG/(2.0*L^0.4)
32.12	1.41368

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
4zjn	0.52965
6ibg	0.52806
5ngd	0.52800
3ja7	0.52101
6qjt	0.51737

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 5 Tertiary structure

Predicted Model 5

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d5"[x]

Model 5 vs Contact (Top L/5)

./work/multicom-P44183/full_length/casp5_contact/L5_long.png

Model 5 vs Contact (Top L/2)

./work/multicom-P44183/full_length/casp5_contact/L2_long.png

Model 5 vs Contact (Top L)

./work/multicom-P44183/full_length/casp5_contact/L_long.png

Model 5 vs Contact (Top 2L)

./work/multicom-P44183/full_length/casp5_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	98.85
TopL/2	89.91
TopL	69.04
Top2L	42.09

( Alignment file )

Alignment	Number
N	5893
Neff	1289

Model comparsion

Model	TM-score
Model 1	0.9097
Model 2	0.8717
Model 3	0.8629
Model 4	0.9183
Average	0.89065

Radius Gyration

RG	RG/(2.0*L^0.4)
31.89	1.40355

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
4zjn	0.53204
6ibg	0.53038
5ngd	0.52958
3ja7	0.52000
6qjt	0.51965

Note: The model is built by ab initio method, no significant templates are found!

Domain Boundary prediction ( View )

Protein sequence

Secondary structure prediction (H: Helix E: Strand C: Coil)

Solvent accessibility prediction (e: Exposed b: Buried)

Disorder prediction (N: Normal T: Disorder)

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

References

Domain Boundary prediction ( View )

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

References

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )