Results of Structure Prediction for Target Name: P62066 ( Click )
Domain Boundary prediction ( View
)

Protein sequence
>P62066: 1-1061-60: | M | S | V | A | R | F | S | C | G | K | T | A | Q | L | S | K | K | Q | T | G | Y | Y | S | P | E | I | F | P | S | T | G | K | D | C | N | P | Q | P | A | N | C | L | K | D | Q | Y | V | L | R | H | C | C | V | D | D | R | S | G | K | M |
61-106: | G | Y | S | V | K | F | L | V | L | T | R | M | D | T | E | T | A | S | L | F | H | C | K | P | C | Y | S | K | M | T | F | T | I | Y | H | P | L | T | H | S | F | F | T | S | C | W |
Secondary structure prediction (H: Helix E: Strand C: Coil)
1-60: | C | E | E | E | E | E | E | C | C | C | C | E | E | E | C | C | C | C | C | C | C | C | C | C | C | E | C | C | C | C | C | C | C | C | C | C | C | C | C | H | H | C | C | C | C | E | E | E | E | E | E | C | C | C | C | C | C | C | C | C |
61-106: | E | E | E | E | E | E | E | E | E | E | E | C | C | C | C | E | C | E | E | E | C | C | C | C | C | C | C | C | E | E | E | E | E | E | C | C | C | C | C | C | E | E | C | C | C | C | ||||||||||||||
H(Helix): 2(1.89%) | E(Strand): 39(36.79%) | C(Coil): 65(61.32%) |
Solvent accessibility prediction (e: Exposed b: Buried)
1-60: | E | E | B | B | E | B | B | B | E | E | E | E | E | B | E | E | E | E | E | E | E | B | E | E | E | E | B | E | E | E | E | E | E | B | E | E | E | E | E | E | B | E | E | E | E | B | B | B | E | B | B | B | B | E | E | E | E | E | E | B |
61-106: | E | B | B | B | B | B | B | B | B | B | E | B | E | E | E | E | B | B | B | B | E | B | E | E | B | B | E | E | B | B | B | B | B | B | B | E | B | E | E | E | B | B | E | E | B | E | ||||||||||||||
e(Exposed): 60(56.6%) | b(Buried): 46(43.4%) |
Disorder prediction (N: Normal T: Disorder)
1-60: | T | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N |
61-106: | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | N | ||||||||||||||
N(Normal): 105(99.06%) | T(Disorder): 1(0.94%) |
Select domain
Predicted contact map and distance map
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Probability to Precision
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Predicted Top 1 Tertiary structure
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Predicted Contact Accuracy
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Long-Range | Precision |
TopL/5 | 19.05 |
TopL/2 | 15.09 |
TopL | 11.32 |
Top2L | 9.43 |
( Alignment file
)
Alignment | Number |
N | 46 |
Neff | 10 |
Model comparsion
Model | TM-score |
Model 2 | 0.4102 |
Model 3 | 0.4028 |
Model 4 | 0.3945 |
Model 5 | 0.4578 |
Average | 0.41633 |
Radius Gyration
Similar pdbs
PDB | TM-score |
5myf | 0.49411 |
2g77 | 0.47935 |
6h4b | 0.47133 |
5mil | 0.47060 |
5mwl | 0.46879 |
Predicted Top 2 Tertiary structure
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Predicted Contact Accuracy
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Long-Range | Precision |
TopL/5 | 4.76 |
TopL/2 | 3.77 |
TopL | 5.66 |
Top2L | 6.13 |
( Alignment file
)
Alignment | Number |
N | 46 |
Neff | 10 |
Model comparsion
Model | TM-score |
Model 1 | 0.4102 |
Model 3 | 0.3713 |
Model 4 | 0.3878 |
Model 5 | 0.3240 |
Average | 0.37333 |
Radius Gyration
Similar pdbs
PDB | TM-score |
4dod | 0.52410 |
2xfg | 0.52305 |
4tf4 | 0.52222 |
3wc3 | 0.52166 |
1js4 | 0.52162 |
Predicted Top 3 Tertiary structure
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Predicted Contact Accuracy
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Long-Range | Precision |
TopL/5 | 14.29 |
TopL/2 | 9.43 |
TopL | 7.55 |
Top2L | 9.43 |
( Alignment file
)
Alignment | Number |
N | 46 |
Neff | 10 |
Model comparsion
Model | TM-score |
Model 1 | 0.4028 |
Model 2 | 0.3713 |
Model 4 | 0.2989 |
Model 5 | 0.2772 |
Average | 0.33755 |
Radius Gyration
Similar pdbs
PDB | TM-score |
2f3o | 0.47354 |
2xqo | 0.47290 |
3w31 | 0.46108 |
1pn0 | 0.46104 |
1foh | 0.46004 |
Predicted Top 4 Tertiary structure
Jmol._Canvas2D (Jmol) "jsmolApplet_M23d4"[x] spinFPS is set too fast (30) -- can't keep up! spinFPS is set too fast (30) -- can't keep up! |
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Predicted Contact Accuracy
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Long-Range | Precision |
TopL/5 | 14.29 |
TopL/2 | 7.55 |
TopL | 4.72 |
Top2L | 6.60 |
( Alignment file
)
Alignment | Number |
N | 46 |
Neff | 10 |
Model comparsion
Model | TM-score |
Model 1 | 0.3945 |
Model 2 | 0.3878 |
Model 3 | 0.2989 |
Model 5 | 0.3878 |
Average | 0.36725 |
Radius Gyration
Similar pdbs
PDB | TM-score |
5c5y | 0.48067 |
2pa5 | 0.47788 |
5c2x | 0.47497 |
1p1x | 0.47344 |
1jcj | 0.47325 |
Predicted Top 5 Tertiary structure
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Predicted Contact Accuracy
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Long-Range | Precision |
TopL/5 | 0.00 |
TopL/2 | 13.21 |
TopL | 10.38 |
Top2L | 10.85 |
( Alignment file
)
Alignment | Number |
N | 46 |
Neff | 10 |
Model comparsion
Model | TM-score |
Model 1 | 0.4578 |
Model 2 | 0.3240 |
Model 3 | 0.2772 |
Model 4 | 0.3878 |
Average | 0.36170 |
Radius Gyration
Similar pdbs
PDB | TM-score |
4n4a | 0.51388 |
4n49 | 0.50732 |
4n48 | 0.50646 |
4fdu | 0.50501 |
6h5x | 0.50176 |