Results of Structure Prediction for Target Name: P9WM57 ( Click )

Domain Boundary prediction ( View )

./work/multicom-P9WM57/P9WM57.domain_info.marker.jpeg

Protein sequence

>P9WM57: 1-451
1-60: MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQI
61-119: GEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQ
121-179: RHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLN
181-239: PDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKA
241-299: PCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLE
301-359: AAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKD
361-419: SGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTE
421-451: WLPPPHLDHGQPRVNTFHHPEKLLADDEGDP

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60: CCCCHHHHHHHHHHHHHHHHHHHHCCHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
61-119: HHHCCCHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
121-179: HCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
181-239: CCCCCCCHHHHHCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
241-299: CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCC
301-359: CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCECCCCCCCCEECCCCCCCCHHHHHHHHHCC
361-419: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHCCCCCCCCCCCEEEEECCCCCEE
421-451: ECCCCCCCCCCCCCCCCCCCCHHCCCCCCCC
H(Helix): 183(40.58%)E(Strand): 24(5.32%)C(Coil): 244(54.1%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60: EEBEEEEBEEBBEBBEEBBEEBBEBEBEEBEEEEBBEBBEBBEEBBEBBEBBBBBBBBBB
61-119: BEEEBBEEBEBEBBEBBBEBBEBBEEEBEBBBEBBEEBBEEEEBEEEEBEEEBEEBBEBB
121-179: EEEEBEBEBBEBBBEBBBEBBEBBEBEBBEEBBEBBBEBBEEBEBEEBEEBBEEBBEBBB
181-239: EEEEEEEBEEBBBBBBBBBEEEBEBBBBBBBBBEBEBBBBBBBBBBEBBBEBBBEEBEEB
241-299: BEBEEEEBEBBBBEEBBBBBBBBBBBBBBBBBBBBEBEEBEEEEEBEBBBBBBBBBBBBB
301-359: EEBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBEEEEBBEBBBEEBEBEEEBBBBBBBBB
361-419: EBBBBBBBEBBBBBBBBBBBBEBBEEBEBBBEBBBBBBBBBBBBEBEEBBBBEEEEBBBB
421-451: BBBBEEBBEEEEEEBEBBBBEEBBEEEEEEE
e(Exposed): 167(37.03%)b(Buried): 284(62.97%)

Disorder prediction (N: Normal T: Disorder)

1-60: TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
61-119: NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
121-179: NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
181-239: NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTT
241-299: TTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
301-359: NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
361-419: NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
421-451: NNNNNNNNNNNNNNNNNNNNNNNNTTTTTTT
N(Normal): 423(93.79%)T(Disorder): 28(6.21%)

Select domain

Predicted contact map and distance map

   

Predicted distance map

./work/contact_dist/P9WM57_d.jpg

   

Predicted contact map

./work/contact_dist/P9WM57_c.jpg

Predicted Top 1 Tertiary structure

   

Predicted Top 2 Tertiary structure

   

Predicted Top 3 Tertiary structure

   

Predicted Top 4 Tertiary structure

   

Predicted Top 5 Tertiary structure

   
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References

[1] Hou, J., Wu, T., Cao, R., & Cheng, J. (2019). Protein tertiary structure modeling driven by deep learning and contact distance prediction in CASP13. bioRxiv, 552422.
[2] Li, J., Deng, X., Eickholt, J., & Cheng, J. (2013). Designing and benchmarking the MULTICOM protein structure prediction system. BMC structural biology, 13(1), 2.
[3] Cheng, J., Li, J., Wang, Z., Eickholt, J., & Deng, X. (2012). The MULTICOM toolbox for protein structure prediction. BMC bioinformatics, 13(1), 65.
[4] Wang, Z., Eickholt, J., & Cheng, J. (2010). MULTICOM: a multi-level combination approach to protein structure prediction and its assessments in CASP8. Bioinformatics, 26(7), 882-888.