Protein sequence

>Q6F6Z7: 1-355

1-60:

M

R

Y

K

Y

P

H

R

D

K

G

Q

I

T

M

S

Q

T

F

E

F

S

I

K

S

I

R

F

D

E

D

Y

R

P

S

D

N

T

R

I

T

N

F

A

N

L

A

R

G

E

S

R

Q

E

N

L

R

N

T

61-119:

L

N

M

I

N

R

F

N

A

L

A

D

W

D

N

P

N

G

D

R

Y

A

V

E

L

D

I

S

V

D

I

D

V

E

G

N

G

E

T

F

P

T

I

E

I

L

K

T

N

I

D

Y

K

N

Q

R

121-179:

I

E

G

I

V

G

N

F

S

Y

V

R

D

Y

D

F

S

V

L

E

H

N

K

N

Q

A

K

F

S

T

P

E

N

Y

G

E

L

H

G

K

I

F

K

S

F

V

N

S

N

T

F

N

D

N

F

S

181-239:

K

Q

P

V

I

C

L

S

V

S

T

K

T

Y

H

R

T

N

Q

H

P

V

L

G

V

E

Y

Q

D

A

Y

S

L

T

D

E

Y

F

A

K

M

G

L

K

V

R

Y

F

M

P

K

N

S

V

A

P

L

241-299:

A

F

Y

F

R

G

D

L

S

D

Y

T

D

L

E

L

I

G

T

I

S

T

M

E

T

F

Q

K

I

Y

R

P

E

I

Y

N

A

N

S

V

A

G

Q

I

Y

Q

P

S

L

K

H

Q

D

F

S

L

T

R

I

301-355:

V

Y

D

R

E

R

S

Q

L

A

I

K

Q

G

K

W

T

E

H

F

M

K

P

Y

Q

S

I

L

E

R

W

A

N

Y

V

D

T

S

F

S

D

K

Y

S

E

K

N

C

A

V

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60:

C

E

C

E

C

E

C

H

C

H

C

H

C

H

61-119:

H

C

E

C

H

E

H

E

C

E

121-179:

C

E

C

E

C

H

C

H

C

H

C

181-239:

C

E

C

E

C

E

C

H

C

E

C

H

241-299:

H

E

C

H

C

H

C

H

C

E

C

E

301-355:

E

C

H

C

H

C

H

C

H(Helix): 121(34.08%)

E(Strand): 77(21.69%)

C(Coil): 157(44.23%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

61-119:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

121-179:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

181-239:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

241-299:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

301-355:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

e(Exposed): 176(49.58%)

b(Buried): 179(50.42%)

Disorder prediction (N: Normal T: Disorder)

1-60:

N

61-119:

N

121-179:

N

181-239:

N

241-299:

N

301-355:

N

T

N

T

N(Normal): 351(98.87%)

T(Disorder): 4(1.13%)

Predicted contact map and distance map

Predicted distance map

Predicted contact map

Probability to Precision

Long-Range	Average probability	Predicted precision
TopL/5	0.83	83.19
TopL/2	0.60	63.08

Note: The linear model (Average probability vs Predicted precision) was trained on CASP14 dataset

Predicted Top 1 Tertiary structure

Predicted Model 1

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d1"[x]

Model 1 vs Contact (Top L/5)

./work/multicom-Q6F6Z7/full_length/casp1_contact/L5_long.png

Model 1 vs Contact (Top L/2)

./work/multicom-Q6F6Z7/full_length/casp1_contact/L2_long.png

Model 1 vs Contact (Top L)

./work/multicom-Q6F6Z7/full_length/casp1_contact/L_long.png

Model 1 vs Contact (Top 2L)

./work/multicom-Q6F6Z7/full_length/casp1_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	92.96
TopL/2	77.53
TopL	54.93
Top2L	37.32

( Alignment file )

Alignment	Number
N	137
Neff	11

Model comparsion

Model	TM-score
Model 2	0.9269
Model 3	0.9252
Model 4	0.9503
Model 5	0.9098
Average	0.92805

Radius Gyration

RG	RG/(2.0*L^0.4)
20.62	0.98550

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
4fyg	0.42913
4fye	0.42107
6oiy	0.40891
4xds	0.40770
6oiw	0.40746

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 2 Tertiary structure

Predicted Model 2

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d2"[x]

Model 2 vs Contact (Top L/5)

./work/multicom-Q6F6Z7/full_length/casp2_contact/L5_long.png

Model 2 vs Contact (Top L/2)

./work/multicom-Q6F6Z7/full_length/casp2_contact/L2_long.png

Model 2 vs Contact (Top L)

./work/multicom-Q6F6Z7/full_length/casp2_contact/L_long.png

Model 2 vs Contact (Top 2L)

./work/multicom-Q6F6Z7/full_length/casp2_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	94.37
TopL/2	75.28
TopL	54.08
Top2L	38.03

( Alignment file )

Alignment	Number
N	137
Neff	11

Model comparsion

Model	TM-score
Model 1	0.9269
Model 3	0.9187
Model 4	0.9253
Model 5	0.8997
Average	0.91765

Radius Gyration

RG	RG/(2.0*L^0.4)
20.86	0.99697

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
4fyg	0.43101
4fye	0.42038

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 3 Tertiary structure

Predicted Model 3

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d3"[x]

Model 3 vs Contact (Top L/5)

./work/multicom-Q6F6Z7/full_length/casp3_contact/L5_long.png

Model 3 vs Contact (Top L/2)

./work/multicom-Q6F6Z7/full_length/casp3_contact/L2_long.png

Model 3 vs Contact (Top L)

./work/multicom-Q6F6Z7/full_length/casp3_contact/L_long.png

Model 3 vs Contact (Top 2L)

./work/multicom-Q6F6Z7/full_length/casp3_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	92.96
TopL/2	77.53
TopL	54.37
Top2L	37.18

( Alignment file )

Alignment	Number
N	137
Neff	11

Model comparsion

Model	TM-score
Model 1	0.9252
Model 2	0.9187
Model 4	0.9216
Model 5	0.8934
Average	0.91473

Radius Gyration

RG	RG/(2.0*L^0.4)
20.57	0.98311

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
4fyg	0.42776
4fyf	0.42523
4fye	0.42027
4ayg	0.40507
4mgh	0.40276

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 4 Tertiary structure

Predicted Model 4

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d4"[x]

Model 4 vs Contact (Top L/5)

./work/multicom-Q6F6Z7/full_length/casp4_contact/L5_long.png

Model 4 vs Contact (Top L/2)

./work/multicom-Q6F6Z7/full_length/casp4_contact/L2_long.png

Model 4 vs Contact (Top L)

./work/multicom-Q6F6Z7/full_length/casp4_contact/L_long.png

Model 4 vs Contact (Top 2L)

./work/multicom-Q6F6Z7/full_length/casp4_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	94.37
TopL/2	78.65
TopL	54.93
Top2L	38.31

( Alignment file )

Alignment	Number
N	137
Neff	11

Model comparsion

Model	TM-score
Model 1	0.9503
Model 2	0.9253
Model 3	0.9216
Model 5	0.9270
Average	0.93105

Radius Gyration

RG	RG/(2.0*L^0.4)
20.35	0.97260

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
4fyg	0.42600
4fyf	0.42482
4fye	0.42110
4xds	0.41141
6oiy	0.40544

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 5 Tertiary structure

Predicted Model 5

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d5"[x]

Model 5 vs Contact (Top L/5)

./work/multicom-Q6F6Z7/full_length/casp5_contact/L5_long.png

Model 5 vs Contact (Top L/2)

./work/multicom-Q6F6Z7/full_length/casp5_contact/L2_long.png

Model 5 vs Contact (Top L)

./work/multicom-Q6F6Z7/full_length/casp5_contact/L_long.png

Model 5 vs Contact (Top 2L)

./work/multicom-Q6F6Z7/full_length/casp5_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	94.37
TopL/2	79.78
TopL	56.62
Top2L	39.44

( Alignment file )

Alignment	Number
N	137
Neff	11

Model comparsion

Model	TM-score
Model 1	0.9098
Model 2	0.8997
Model 3	0.8934
Model 4	0.9270
Average	0.90748

Radius Gyration

RG	RG/(2.0*L^0.4)
20.34	0.97212

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
4fyg	0.43651
4fyf	0.43429
4fye	0.42950
4lgy	0.41817
3ugj	0.41786

Note: The model is built by ab initio method, no significant templates are found!

Domain Boundary prediction ( View )

Protein sequence

Secondary structure prediction (H: Helix E: Strand C: Coil)

Solvent accessibility prediction (e: Exposed b: Buried)

Disorder prediction (N: Normal T: Disorder)

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

References

Domain Boundary prediction ( View )

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

References

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )