Results of Structure Prediction for Target Name: Q6F8C5 ( Click )

Domain Boundary prediction ( View )

./work/multicom-Q6F8C5/Q6F8C5.domain_info.marker.jpeg

Protein sequence

>Q6F8C5: 1-172
1-60: MLAFNLLRSAHMLNPALQVLAKDGSIADNTYQPIAEDGVIPAGDVVMTTAQLDQLTAIQG
61-119: KKALYITVNDSPETHQFPLDQLDAIFIEFAGFNDGRGYSFAALLRRQGYQGELRAVGDIF
121-172: KDVLNYLKRSGFDTFVIKEGKDIQEAAAGLNDFRQPYQASTAVPQADYQTGA

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60: CCCHHHHCCCCCCCCCCHHHHCCCCEECCCEEEECCCCCCCCCCEEEEHHHHHHHHHCCC
61-119: CEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCHHH
121-172: HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCHECCCCCCCCHHHHHCC
H(Helix): 62(36.05%)E(Strand): 29(16.86%)C(Coil): 81(47.09%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60: EBBBEBBEBEEBBBEBBEEBBEEEEBBEBEBBBBEEEEEBEEEEBBBBBEBBEEBEEEEE
61-119: EBBBBBEBEEEBEEBBEBBEEBBBBBBBBEEBEEBBBBBBBBBBBEBEBEBBBBBEBEBB
121-172: BBBBBBBBBBBBEBBEBEEEEEBEEBBEBBEEBEEEBBEEBEEEEBBBEEEE
e(Exposed): 75(43.6%)b(Buried): 97(56.4%)

Disorder prediction (N: Normal T: Disorder)

1-60: TTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
61-119: NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
121-172: NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTT
N(Normal): 155(90.12%)T(Disorder): 17(9.88%)

Select domain

Predicted contact map and distance map

   

Predicted distance map

./work/contact_dist/Q6F8C5_d.jpg

   

Predicted contact map

./work/contact_dist/Q6F8C5_c.jpg

Predicted Top 1 Tertiary structure

   

Predicted Top 2 Tertiary structure

   

Predicted Top 3 Tertiary structure

   

Predicted Top 4 Tertiary structure

   

Predicted Top 5 Tertiary structure

   

References

[1] Hou, J., Wu, T., Cao, R., & Cheng, J. (2019). Protein tertiary structure modeling driven by deep learning and contact distance prediction in CASP13. bioRxiv, 552422.
[2] Li, J., Deng, X., Eickholt, J., & Cheng, J. (2013). Designing and benchmarking the MULTICOM protein structure prediction system. BMC structural biology, 13(1), 2.
[3] Cheng, J., Li, J., Wang, Z., Eickholt, J., & Deng, X. (2012). The MULTICOM toolbox for protein structure prediction. BMC bioinformatics, 13(1), 65.
[4] Wang, Z., Eickholt, J., & Cheng, J. (2010). MULTICOM: a multi-level combination approach to protein structure prediction and its assessments in CASP8. Bioinformatics, 26(7), 882-888.
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