Protein sequence

>Q8A0U4: 1-180

1-60:

M

K

D

T

K

Q

F

E

H

V

I

A

L

C

R

D

L

F

S

K

L

H

D

Y

G

P

A

W

R

I

L

R

P

A

S

V

T

D

Q

I

F

I

K

A

N

R

I

R

S

I

E

T

K

G

V

T

L

V

61-119:

N

E

G

I

R

S

E

F

I

A

I

V

N

Y

G

I

G

L

I

Q

L

E

L

G

Y

A

E

S

A

D

I

S

N

E

A

L

A

L

Y

D

K

H

A

K

E

A

L

E

L

M

L

A

K

N

H

D

Y

D

121-179:

E

A

W

R

S

M

R

V

S

Y

T

D

L

I

L

M

K

I

Y

R

T

K

Q

I

E

S

L

A

G

N

T

L

V

S

E

G

I

D

A

N

Y

M

D

M

I

N

Y

S

V

F

G

L

I

K

I

E

F

E

G

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60:

C

H

C

H

C

H

C

E

C

61-119:

C

H

C

H

C

H

121-179:

H

C

H

C

E

C

H

C

H(Helix): 132(73.33%)

E(Strand): 4(2.22%)

C(Coil): 44(24.44%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

61-119:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

121-179:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

e(Exposed): 89(49.44%)

b(Buried): 91(50.56%)

Disorder prediction (N: Normal T: Disorder)

1-60:

N

61-119:

N

121-179:

N

N(Normal): 180(100%)

T(Disorder): 0(0%)

Predicted contact map and distance map

Predicted distance map

Predicted contact map

Probability to Precision

Long-Range	Average probability	Predicted precision
TopL/5	0.96	95.41
TopL/2	0.87	91.18

Note: The linear model (Average probability vs Predicted precision) was trained on CASP14 dataset

Predicted Top 1 Tertiary structure

Predicted Model 1

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d1"[x]

Model 1 vs Contact (Top L/5)

./work/multicom-Q8A0U4/full_length/casp1_contact/L5_long.png

Model 1 vs Contact (Top L/2)

./work/multicom-Q8A0U4/full_length/casp1_contact/L2_long.png

Model 1 vs Contact (Top L)

./work/multicom-Q8A0U4/full_length/casp1_contact/L_long.png

Model 1 vs Contact (Top 2L)

./work/multicom-Q8A0U4/full_length/casp1_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	98.89
TopL	71.67
Top2L	37.50

( Alignment file )

Alignment	Number
N	1823
Neff	118

Model comparsion

Model	TM-score
Model 2	0.9867
Model 3	0.9894
Model 4	0.9814
Model 5	0.9804
Average	0.98447

Radius Gyration

RG	RG/(2.0*L^0.4)
15.96	1.00199

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
5myd	0.57196
5myf	0.57052
5myi	0.56789
5fb9	0.55615
1w2y	0.55208

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 2 Tertiary structure

Predicted Model 2

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d2"[x]

Model 2 vs Contact (Top L/5)

./work/multicom-Q8A0U4/full_length/casp2_contact/L5_long.png

Model 2 vs Contact (Top L/2)

./work/multicom-Q8A0U4/full_length/casp2_contact/L2_long.png

Model 2 vs Contact (Top L)

./work/multicom-Q8A0U4/full_length/casp2_contact/L_long.png

Model 2 vs Contact (Top 2L)

./work/multicom-Q8A0U4/full_length/casp2_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	100.00
TopL	72.78
Top2L	38.89

( Alignment file )

Alignment	Number
N	1823
Neff	118

Model comparsion

Model	TM-score
Model 1	0.9867
Model 3	0.9893
Model 4	0.9833
Model 5	0.9834
Average	0.98567

Radius Gyration

RG	RG/(2.0*L^0.4)
15.99	1.00387

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
5myd	0.57130
5myf	0.57019
5myi	0.56754
1w2y	0.55280
2cic	0.54938

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 3 Tertiary structure

Predicted Model 3

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d3"[x]

Model 3 vs Contact (Top L/5)

./work/multicom-Q8A0U4/full_length/casp3_contact/L5_long.png

Model 3 vs Contact (Top L/2)

./work/multicom-Q8A0U4/full_length/casp3_contact/L2_long.png

Model 3 vs Contact (Top L)

./work/multicom-Q8A0U4/full_length/casp3_contact/L_long.png

Model 3 vs Contact (Top 2L)

./work/multicom-Q8A0U4/full_length/casp3_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	98.89
TopL	71.11
Top2L	37.50

( Alignment file )

Alignment	Number
N	1823
Neff	118

Model comparsion

Model	TM-score
Model 1	0.9894
Model 2	0.9893
Model 4	0.9875
Model 5	0.9822
Average	0.98710

Radius Gyration

RG	RG/(2.0*L^0.4)
16.02	1.00575

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
5myd	0.57119
5myf	0.57036
5myi	0.56663
1w2y	0.55287
2cic	0.54931

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 4 Tertiary structure

Predicted Model 4

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d4"[x]

Model 4 vs Contact (Top L/5)

./work/multicom-Q8A0U4/full_length/casp4_contact/L5_long.png

Model 4 vs Contact (Top L/2)

./work/multicom-Q8A0U4/full_length/casp4_contact/L2_long.png

Model 4 vs Contact (Top L)

./work/multicom-Q8A0U4/full_length/casp4_contact/L_long.png

Model 4 vs Contact (Top 2L)

./work/multicom-Q8A0U4/full_length/casp4_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	98.89
TopL	71.67
Top2L	37.78

( Alignment file )

Alignment	Number
N	1823
Neff	118

Model comparsion

Model	TM-score
Model 1	0.9814
Model 2	0.9833
Model 3	0.9875
Model 5	0.9796
Average	0.98295

Radius Gyration

RG	RG/(2.0*L^0.4)
16.05	1.00764

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
5myd	0.56807
5myf	0.56693
5myi	0.56231
1w2y	0.55377
2cic	0.54810

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 5 Tertiary structure

Predicted Model 5

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d5"[x]

Model 5 vs Contact (Top L/5)

./work/multicom-Q8A0U4/full_length/casp5_contact/L5_long.png

Model 5 vs Contact (Top L/2)

./work/multicom-Q8A0U4/full_length/casp5_contact/L2_long.png

Model 5 vs Contact (Top L)

./work/multicom-Q8A0U4/full_length/casp5_contact/L_long.png

Model 5 vs Contact (Top 2L)

./work/multicom-Q8A0U4/full_length/casp5_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	100.00
TopL/2	98.89
TopL	71.67
Top2L	37.78

( Alignment file )

Alignment	Number
N	1823
Neff	118

Model comparsion

Model	TM-score
Model 1	0.9804
Model 2	0.9834
Model 3	0.9822
Model 4	0.9796
Average	0.98140

Radius Gyration

RG	RG/(2.0*L^0.4)
16.05	1.00764

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
5myd	0.57241
5myf	0.57154
5myi	0.56865
1w2y	0.55362
2cic	0.55149

Note: The model is built by ab initio method, no significant templates are found!

Domain Boundary prediction ( View )

Protein sequence

Secondary structure prediction (H: Helix E: Strand C: Coil)

Solvent accessibility prediction (e: Exposed b: Buried)

Disorder prediction (N: Normal T: Disorder)

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

References

Domain Boundary prediction ( View )

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

References

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )