Protein sequence

>Q98Q90: 1-560

1-60:

M

F

K

N

W

F

L

T

G

D

F

D

E

D

E

D

E

N

E

K

N

V

L

S

D

I

L

K

V

P

E

V

Q

V

F

K

D

H

K

N

V

A

I

N

F

L

K

S

N

Y

S

N

H

E

L

V

I

61-119:

N

S

K

L

S

L

E

Q

K

V

E

K

T

L

A

F

S

K

E

K

N

K

I

V

N

P

V

F

Q

W

K

N

I

S

R

P

F

A

Y

F

T

S

E

H

K

L

I

N

L

K

L

S

T

K

R

E

121-179:

D

F

R

A

F

D

I

E

I

E

K

I

L

D

F

Q

I

L

D

Y

A

Q

L

I

F

K

I

K

Q

N

T

K

A

R

V

I

E

F

E

I

A

S

A

H

A

S

K

S

K

S

T

K

R

S

N

181-239:

Y

S

R

N

Y

S

E

Y

V

E

Q

K

R

K

N

S

Y

G

I

E

T

D

K

T

H

I

L

E

D

F

S

N

Y

E

F

K

S

K

I

G

Y

C

S

I

F

E

V

Y

H

E

I

N

D

G

Q

S

A

241-299:

S

Y

P

E

I

G

H

D

Q

I

V

T

K

N

T

L

V

N

H

P

F

R

N

E

I

K

N

F

L

Y

P

E

F

K

D

S

M

K

F

K

I

G

D

I

N

F

D

Y

K

A

L

K

T

L

E

L

301-359:

R

K

I

D

F

K

I

A

N

Y

N

G

F

V

K

L

Q

N

Y

R

Q

K

D

I

E

Y

I

W

Y

D

F

E

S

I

N

F

P

L

P

V

D

Y

A

L

Y

Q

H

I

P

F

Q

V

S

I

K

T

361-419:

K

D

S

K

I

F

S

E

D

H

V

I

D

P

K

Q

I

S

I

E

D

L

E

I

V

Y

K

I

Y

G

S

E

F

N

L

E

N

K

N

K

Y

V

Y

N

K

S

F

E

N

K

A

L

W

L

I

A

421-479:

D

L

V

Q

S

K

T

K

N

I

R

H

K

L

I

D

M

V

E

Q

I

A

N

T

L

D

L

D

F

S

M

N

K

D

Y

S

V

I

G

S

L

E

G

K

Y

S

I

K

L

E

K

Y

I

N

481-539:

K

N

F

N

L

K

H

K

I

K

P

Y

K

E

L

E

I

Q

N

G

L

A

M

T

E

G

I

K

R

F

L

G

Q

S

H

D

Q

S

W

K

I

E

N

L

K

Q

Y

C

H

N

D

V

M

A

M

L

541-560:

M

V

Y

E

F

I

E

Y

I

A

E

I

E

Q

K

R

L

E

K

S

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60:

C

H

C

H

C

H

C

E

61-119:

C

H

C

E

C

E

C

E

H

C

E

C

H

121-179:

H

C

E

C

E

C

181-239:

C

H

C

H

C

H

C

241-299:

C

H

C

H

C

H

C

H

C

H

C

H

301-359:

C

H

C

E

C

E

361-419:

C

E

C

E

C

H

C

E

C

H

421-479:

H

C

E

C

E

H

C

481-539:

C

E

C

H

C

H

541-560:

H

C

H(Helix): 259(46.25%)

E(Strand): 79(14.11%)

C(Coil): 222(39.64%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

61-119:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

121-179:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

181-239:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

241-299:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

301-359:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

361-419:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

421-479:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

481-539:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

541-560:

B

E

B

E

B

E

B

E

e(Exposed): 309(55.18%)

b(Buried): 251(44.82%)

Disorder prediction (N: Normal T: Disorder)

1-60:

T

N

T

N

61-119:

N

121-179:

N

181-239:

N

241-299:

N

301-359:

N

361-419:

N

421-479:

N

481-539:

N

541-560:

N

T

N(Normal): 545(97.32%)

T(Disorder): 15(2.68%)

Predicted contact map and distance map

Predicted distance map

Predicted contact map

Probability to Precision

Long-Range	Average probability	Predicted precision
TopL/5	0.90	89.24
TopL/2	0.75	79.23

Note: The linear model (Average probability vs Predicted precision) was trained on CASP14 dataset

Predicted Top 1 Tertiary structure

Predicted Model 1

Model 1 vs Contact (Top L/5)

./work/multicom-Q98Q90/full_length/casp1_contact/L5_long.png

Model 1 vs Contact (Top L/2)

./work/multicom-Q98Q90/full_length/casp1_contact/L2_long.png

Model 1 vs Contact (Top L)

./work/multicom-Q98Q90/full_length/casp1_contact/L_long.png

Model 1 vs Contact (Top 2L)

./work/multicom-Q98Q90/full_length/casp1_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	72.32
TopL/2	67.86
TopL	48.39
Top2L	30.98

( Alignment file )

Alignment	Number
N	2580
Neff	1252

Model comparsion

Model	TM-score
Model 2	0.4787
Model 3	0.4645
Model 4	0.4818
Model 5	0.5128
Average	0.48445

Radius Gyration

RG	RG/(2.0*L^0.4)
26.27	1.04584

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
5eax	0.40969
5ean	0.40804

Note: This is multi-domain structure, check alignments and domain qualities in individual domains!

Predicted Top 2 Tertiary structure

Predicted Model 2

Model 2 vs Contact (Top L/5)

./work/multicom-Q98Q90/full_length/casp2_contact/L5_long.png

Model 2 vs Contact (Top L/2)

./work/multicom-Q98Q90/full_length/casp2_contact/L2_long.png

Model 2 vs Contact (Top L)

./work/multicom-Q98Q90/full_length/casp2_contact/L_long.png

Model 2 vs Contact (Top 2L)

./work/multicom-Q98Q90/full_length/casp2_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	72.32
TopL/2	66.43
TopL	48.39
Top2L	30.45

( Alignment file )

Alignment	Number
N	2580
Neff	1252

Model comparsion

Model	TM-score
Model 1	0.4787
Model 3	0.4867
Model 4	0.5440
Model 5	0.4820
Average	0.49785

Radius Gyration

RG	RG/(2.0*L^0.4)
25.09	0.99886

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
2qln	0.41796
2ecp	0.41783
8gpb	0.41762
3l79	0.41750
6s4k	0.41724

Note: This is multi-domain structure, check alignments and domain qualities in individual domains!

Predicted Top 3 Tertiary structure

Predicted Model 3

Model 3 vs Contact (Top L/5)

./work/multicom-Q98Q90/full_length/casp3_contact/L5_long.png

Model 3 vs Contact (Top L/2)

./work/multicom-Q98Q90/full_length/casp3_contact/L2_long.png

Model 3 vs Contact (Top L)

./work/multicom-Q98Q90/full_length/casp3_contact/L_long.png

Model 3 vs Contact (Top 2L)

./work/multicom-Q98Q90/full_length/casp3_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	68.75
TopL/2	62.14
TopL	43.75
Top2L	26.61

( Alignment file )

Alignment	Number
N	2580
Neff	1252

Model comparsion

Model	TM-score
Model 1	0.4645
Model 2	0.4867
Model 4	0.4890
Model 5	0.4660
Average	0.47655

Radius Gyration

RG	RG/(2.0*L^0.4)
24.39	0.97100

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
	significant

Note: This is multi-domain structure, check alignments and domain qualities in individual domains!

Predicted Top 4 Tertiary structure

Predicted Model 4

Model 4 vs Contact (Top L/5)

./work/multicom-Q98Q90/full_length/casp4_contact/L5_long.png

Model 4 vs Contact (Top L/2)

./work/multicom-Q98Q90/full_length/casp4_contact/L2_long.png

Model 4 vs Contact (Top L)

./work/multicom-Q98Q90/full_length/casp4_contact/L_long.png

Model 4 vs Contact (Top 2L)

./work/multicom-Q98Q90/full_length/casp4_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	73.21
TopL/2	63.57
TopL	46.25
Top2L	29.20

( Alignment file )

Alignment	Number
N	2580
Neff	1252

Model comparsion

Model	TM-score
Model 1	0.4818
Model 2	0.5440
Model 3	0.4890
Model 5	0.4707
Average	0.49638

Radius Gyration

RG	RG/(2.0*L^0.4)
24.24	0.96502

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
	significant

Note: This is multi-domain structure, check alignments and domain qualities in individual domains!

Predicted Top 5 Tertiary structure

Predicted Model 5

Model 5 vs Contact (Top L/5)

./work/multicom-Q98Q90/full_length/casp5_contact/L5_long.png

Model 5 vs Contact (Top L/2)

./work/multicom-Q98Q90/full_length/casp5_contact/L2_long.png

Model 5 vs Contact (Top L)

./work/multicom-Q98Q90/full_length/casp5_contact/L_long.png

Model 5 vs Contact (Top 2L)

./work/multicom-Q98Q90/full_length/casp5_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	72.32
TopL/2	63.93
TopL	45.71
Top2L	28.93

( Alignment file )

Alignment	Number
N	2580
Neff	1252

Model comparsion

Model	TM-score
Model 1	0.5128
Model 2	0.4820
Model 3	0.4660
Model 4	0.4707
Average	0.48288

Radius Gyration

RG	RG/(2.0*L^0.4)
23.25	0.92561

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
	significant

Note: This is multi-domain structure, check alignments and domain qualities in individual domains!

Domain Boundary prediction ( View )

Protein sequence

Secondary structure prediction (H: Helix E: Strand C: Coil)

Solvent accessibility prediction (e: Exposed b: Buried)

Disorder prediction (N: Normal T: Disorder)

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

References

Domain Boundary prediction ( View )

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

References

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )