Protein sequence

>Q9KMC9: 1-285

1-60:

M

Y

K

Y

I

S

N

E

L

P

Q

F

E

N

G

M

L

R

F

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G

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N

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Y

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61-119:

Q

N

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Y

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M

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F

A

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L

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N

H

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K

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I

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A

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G

L

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A

N

G

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Q

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Y

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L

121-179:

C

L

S

A

K

E

D

S

L

M

W

S

H

Y

G

N

S

H

K

G

Y

V

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S

H

K

F

N

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N

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Y

A

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Y

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R

181-239:

R

K

T

I

L

F

W

Q

K

A

M

S

E

V

F

L

T

K

G

S

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W

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Y

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E

Y

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L

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T

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N

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N

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H

L

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H

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241-285:

G

A

K

C

E

D

E

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Q

N

S

I

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K

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H

W

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L

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L

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N

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K

I

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60:

C

E

C

H

C

E

C

H

C

H

C

61-119:

C

H

C

H

C

H

C

E

121-179:

E

C

H

C

E

C

H

C

E

C

181-239:

C

H

C

H

E

C

E

C

H

E

241-285:

E

C

H

C

E

C

E

C

H(Helix): 117(41.05%)

E(Strand): 48(16.84%)

C(Coil): 120(42.11%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

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B

E

B

E

61-119:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

121-179:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

181-239:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

241-285:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

e(Exposed): 161(56.49%)

b(Buried): 124(43.51%)

Disorder prediction (N: Normal T: Disorder)

1-60:

N

61-119:

N

121-179:

N

181-239:

N

241-285:

N

N(Normal): 285(100%)

T(Disorder): 0(0%)

Predicted contact map and distance map

Predicted distance map

Predicted contact map

Probability to Precision

Long-Range	Average probability	Predicted precision
TopL/5	0.94	93.24
TopL/2	0.83	87.04

Note: The linear model (Average probability vs Predicted precision) was trained on CASP14 dataset

Predicted Top 1 Tertiary structure

Predicted Model 1

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d1"[x]

Model 1 vs Contact (Top L/5)

./work/multicom-Q9KMC9/full_length/casp1_contact/L5_long.png

Model 1 vs Contact (Top L/2)

./work/multicom-Q9KMC9/full_length/casp1_contact/L2_long.png

Model 1 vs Contact (Top L)

./work/multicom-Q9KMC9/full_length/casp1_contact/L_long.png

Model 1 vs Contact (Top 2L)

./work/multicom-Q9KMC9/full_length/casp1_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	98.25
TopL/2	96.50
TopL	82.11
Top2L	54.39

( Alignment file )

Alignment	Number
N	5790
Neff	2537

Model comparsion

Model	TM-score
Model 2	0.9746
Model 3	0.9698
Model 4	0.9667
Model 5	0.9680
Average	0.96977

Radius Gyration

RG	RG/(2.0*L^0.4)
21.68	1.13162

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
6ubz	0.40762
4zlk	0.40613
1qxp	0.40555
1oe9	0.40349
6vl7	0.40236

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 2 Tertiary structure

Predicted Model 2

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d2"[x]

Model 2 vs Contact (Top L/5)

./work/multicom-Q9KMC9/full_length/casp2_contact/L5_long.png

Model 2 vs Contact (Top L/2)

./work/multicom-Q9KMC9/full_length/casp2_contact/L2_long.png

Model 2 vs Contact (Top L)

./work/multicom-Q9KMC9/full_length/casp2_contact/L_long.png

Model 2 vs Contact (Top 2L)

./work/multicom-Q9KMC9/full_length/casp2_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	98.25
TopL/2	97.20
TopL	81.40
Top2L	54.39

( Alignment file )

Alignment	Number
N	5790
Neff	2537

Model comparsion

Model	TM-score
Model 1	0.9746
Model 3	0.9777
Model 4	0.9693
Model 5	0.9672
Average	0.97220

Radius Gyration

RG	RG/(2.0*L^0.4)
21.60	1.12745

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
6ufq	0.41052
2iuj	0.40763
6vmw	0.40725
1n8q	0.40696
6ubn	0.40657

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 3 Tertiary structure

Predicted Model 3

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d3"[x]

Model 3 vs Contact (Top L/5)

./work/multicom-Q9KMC9/full_length/casp3_contact/L5_long.png

Model 3 vs Contact (Top L/2)

./work/multicom-Q9KMC9/full_length/casp3_contact/L2_long.png

Model 3 vs Contact (Top L)

./work/multicom-Q9KMC9/full_length/casp3_contact/L_long.png

Model 3 vs Contact (Top 2L)

./work/multicom-Q9KMC9/full_length/casp3_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	98.25
TopL/2	95.80
TopL	78.25
Top2L	52.81

( Alignment file )

Alignment	Number
N	5790
Neff	2537

Model comparsion

Model	TM-score
Model 1	0.9698
Model 2	0.9777
Model 4	0.9680
Model 5	0.9776
Average	0.97327

Radius Gyration

RG	RG/(2.0*L^0.4)
21.54	1.12432

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
6ufq	0.40849
6vmw	0.40519
5a7m	0.40402
1rrl	0.40372
1n8q	0.40231

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 4 Tertiary structure

Predicted Model 4

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d4"[x]

Model 4 vs Contact (Top L/5)

./work/multicom-Q9KMC9/full_length/casp4_contact/L5_long.png

Model 4 vs Contact (Top L/2)

./work/multicom-Q9KMC9/full_length/casp4_contact/L2_long.png

Model 4 vs Contact (Top L)

./work/multicom-Q9KMC9/full_length/casp4_contact/L_long.png

Model 4 vs Contact (Top 2L)

./work/multicom-Q9KMC9/full_length/casp4_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	98.25
TopL/2	97.20
TopL	80.70
Top2L	54.21

( Alignment file )

Alignment	Number
N	5790
Neff	2537

Model comparsion

Model	TM-score
Model 1	0.9667
Model 2	0.9693
Model 3	0.9680
Model 5	0.9616
Average	0.96640

Radius Gyration

RG	RG/(2.0*L^0.4)
21.69	1.13215

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
1w8j	0.41181
2ec6	0.40859
4pd3	0.40656
4zlk	0.40648
6ufq	0.40613

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 5 Tertiary structure

Predicted Model 5

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d5"[x]

Model 5 vs Contact (Top L/5)

./work/multicom-Q9KMC9/full_length/casp5_contact/L5_long.png

Model 5 vs Contact (Top L/2)

./work/multicom-Q9KMC9/full_length/casp5_contact/L2_long.png

Model 5 vs Contact (Top L)

./work/multicom-Q9KMC9/full_length/casp5_contact/L_long.png

Model 5 vs Contact (Top 2L)

./work/multicom-Q9KMC9/full_length/casp5_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	98.25
TopL/2	96.50
TopL	80.70
Top2L	53.86

( Alignment file )

Alignment	Number
N	5790
Neff	2537

Model comparsion

Model	TM-score
Model 1	0.9680
Model 2	0.9672
Model 3	0.9776
Model 4	0.9616
Average	0.96860

Radius Gyration

RG	RG/(2.0*L^0.4)
21.60	1.12745

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
1rrl	0.40967
6ufq	0.40701
6vmw	0.40681
4wfo	0.40652
1ik3	0.40579

Note: The model is built by ab initio method, no significant templates are found!

Domain Boundary prediction ( View )

Protein sequence

Secondary structure prediction (H: Helix E: Strand C: Coil)

Solvent accessibility prediction (e: Exposed b: Buried)

Disorder prediction (N: Normal T: Disorder)

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

References

Domain Boundary prediction ( View )

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

References

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )