Protein sequence

>Q9KRJ6: 1-414

1-60:

M

S

P

I

E

L

W

L

Y

S

L

Q

E

K

G

S

P

M

H

K

P

L

S

I

A

V

L

T

V

A

L

V

G

C

Q

S

E

T

Q

S

N

T

G

L

T

A

Q

A

K

A

D

A

V

A

Q

K

61-119:

R

Q

L

A

E

S

F

S

Q

N

Y

A

Y

A

H

T

L

K

T

Q

I

S

A

D

N

L

S

I

S

V

S

E

L

V

E

S

A

P

N

T

E

M

S

Q

L

R

S

A

D

K

N

V

R

T

L

K

G

I

121-179:

D

Q

F

T

E

Q

L

Q

L

R

L

A

D

A

S

M

L

K

E

W

Q

E

G

Q

S

P

L

F

A

F

E

P

S

G

N

D

S

W

Q

Y

I

E

A

Y

D

V

Y

G

Q

I

H

Q

L

D

V

Y

Q

L

181-239:

P

D

V

P

V

F

V

D

N

D

S

A

V

E

L

K

A

G

L

Q

A

M

R

A

E

M

Q

R

L

G

Q

S

P

Q

L

S

T

Q

E

S

I

E

A

S

T

R

S

L

S

R

S

A

S

A

D

T

A

241-299:

P

I

S

T

V

L

K

I

R

L

Q

D

K

E

P

W

I

S

G

R

A

E

I

Y

A

L

V

T

G

V

D

P

S

R

D

K

P

T

I

D

L

I

D

M

P

Y

L

D

Y

D

K

Q

D

Y

F

P

N

301-359:

Q

V

I

H

W

T

R

Y

R

W

G

A

D

M

I

L

M

E

Q

D

G

T

D

Y

K

E

L

A

K

Q

L

V

K

V

A

E

V

L

K

L

I

P

D

P

E

V

Q

G

Y

A

I

A

Q

I

T

361-414:

G

K

I

E

A

I

P

D

G

V

L

V

N

D

F

V

D

V

F

Y

T

L

M

Q

D

T

Q

Y

T

D

H

P

G

A

N

G

N

A

T

A

T

F

E

P

L

T

I

Y

P

T

K

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60:

C

H

C

E

H

C

H

C

H

61-119:

H

C

H

C

H

C

121-179:

C

E

C

H

C

E

C

E

C

E

C

181-239:

C

E

C

H

C

241-299:

C

E

C

E

C

E

C

E

C

301-359:

C

E

C

E

C

H

C

H

361-414:

H

C

E

C

E

C

E

C

E

C

E

C

H(Helix): 131(31.64%)

E(Strand): 85(20.53%)

C(Coil): 198(47.83%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

61-119:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

121-179:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

181-239:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

241-299:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

301-359:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

361-414:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

e(Exposed): 219(52.9%)

b(Buried): 195(47.1%)

Disorder prediction (N: Normal T: Disorder)

1-60:

T

N

61-119:

N

121-179:

N

181-239:

N

T

N

241-299:

N

301-359:

N

361-414:

N

T

N(Normal): 383(92.51%)

T(Disorder): 31(7.49%)

Predicted contact map and distance map

Predicted distance map

Predicted contact map

Probability to Precision

Long-Range	Average probability	Predicted precision
TopL/5	0.95	93.98
TopL/2	0.82	85.75

Note: The linear model (Average probability vs Predicted precision) was trained on CASP14 dataset

Predicted Top 1 Tertiary structure

Predicted Model 1

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d1"[x]

Model 1 vs Contact (Top L/5)

./work/multicom-Q9KRJ6/full_length/casp1_contact/L5_long.png

Model 1 vs Contact (Top L/2)

./work/multicom-Q9KRJ6/full_length/casp1_contact/L2_long.png

Model 1 vs Contact (Top L)

./work/multicom-Q9KRJ6/full_length/casp1_contact/L_long.png

Model 1 vs Contact (Top 2L)

./work/multicom-Q9KRJ6/full_length/casp1_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	98.80
TopL/2	95.65
TopL	77.05
Top2L	48.19

( Alignment file )

Alignment	Number
N	759
Neff	126

Model comparsion

Model	TM-score
Model 2	0.0761
Model 3	0.0761
Model 4	0.8583
Model 5	0.0761
Average	0.27165

Radius Gyration

RG	RG/(2.0*L^0.4)
23.26	1.04520

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
	significant

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 2 Tertiary structure

Predicted Model 2

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d2"[x]

Model 2 vs Contact (Top L/5)

./work/multicom-Q9KRJ6/full_length/casp2_contact/L5_long.png

Model 2 vs Contact (Top L/2)

./work/multicom-Q9KRJ6/full_length/casp2_contact/L2_long.png

Model 2 vs Contact (Top L)

./work/multicom-Q9KRJ6/full_length/casp2_contact/L_long.png

Model 2 vs Contact (Top 2L)

./work/multicom-Q9KRJ6/full_length/casp2_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	0.00
TopL/2	0.00
TopL	0.00
Top2L	0.00

( Alignment file )

Alignment	Number
N	759
Neff	126

Model comparsion

Model	TM-score
Model 1	0.0761
Model 3	1.0000
Model 4	0.0747
Model 5	1.0000
Average	0.53770

Radius Gyration

RG	RG/(2.0*L^0.4)
245.41	11.02763

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
	significant

>Q9KRJ6 MSPIELWLYSLQQEKGSPMHKPLSIAVLLTVALVGCQSEETQSNTGLTAQAKADAVVAQKRQLAESFSQNYAAYAHTLKTQISADNLSISVSELVESAPNTEMSQQLRSADKNVRTLKGIDQFTEQLLQLRLADASMLKEWQEGQSPLFAFEPSGNDDSWQYIEAYDVYGQIHQLDVYQLPDVPVFVVDNDSAVELKAGLQAMRAEMQRLGQSPQLSTQESSSIEASTRSLSRSASADTAPISTTVLKKIRLQDDKEPWISGRAEIYALVTGVDPSRDKPTIDLIDMPYLDYDKQDYFPNQVVIHWTRYRWGAADMILMEQDDGTDYKELAKQLVKVAEEVLKLIPDPEVQGYAIIAQITGKIIEAIPDGVLVNDDDFVDVFYTLMQDTQYTDHPGANGNATATFEPLTIYPTK* >2PE4A|pos:81-109 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLIAHLARTFQDILAAIPAPDFSGLAVID---------------------------------------------------------*

( Image Alignment )

Predicted Top 3 Tertiary structure

Predicted Model 3

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d3"[x]

Model 3 vs Contact (Top L/5)

./work/multicom-Q9KRJ6/full_length/casp3_contact/L5_long.png

Model 3 vs Contact (Top L/2)

./work/multicom-Q9KRJ6/full_length/casp3_contact/L2_long.png

Model 3 vs Contact (Top L)

./work/multicom-Q9KRJ6/full_length/casp3_contact/L_long.png

Model 3 vs Contact (Top 2L)

./work/multicom-Q9KRJ6/full_length/casp3_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	0.00
TopL/2	0.00
TopL	0.00
Top2L	0.00

( Alignment file )

Alignment	Number
N	759
Neff	126

Model comparsion

Model	TM-score
Model 1	0.0761
Model 2	1.0000
Model 4	0.0747
Model 5	1.0000
Average	0.53770

Radius Gyration

RG	RG/(2.0*L^0.4)
245.41	11.02763

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
	significant

>Q9KRJ6 MSPIELWLYSLQQEKGSPMHKPLSIAVLLTVALVGCQSEETQSNTGLTAQAKADAVVAQKRQLAESFSQNYAAYAHTLKTQISADNLSISVSELVESAPNTEMSQQLRSADKNVRTLKGIDQFTEQLLQLRLADASMLKEWQEGQSPLFAFEPSGNDDSWQYIEAYDVYGQIHQLDVYQLPDVPVFVVDNDSAVELKAGLQAMRAEMQRLGQSPQLSTQESSSIEASTRSLSRSASADTAPISTTVLKKIRLQDDKEPWISGRAEIYALVTGVDPSRDKPTIDLIDMPYLDYDKQDYFPNQVVIHWTRYRWGAADMILMEQDDGTDYKELAKQLVKVAEEVLKLIPDPEVQGYAIIAQITGKIIEAIPDGVLVNDDDFVDVFYTLMQDTQYTDHPGANGNATATFEPLTIYPTK* >2PE4A|pos:81-109 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLIAHLARTFQDILAAIPAPDFSGLAVID---------------------------------------------------------*

( Image Alignment )

Predicted Top 4 Tertiary structure

Predicted Model 4

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d4"[x]

Model 4 vs Contact (Top L/5)

./work/multicom-Q9KRJ6/full_length/casp4_contact/L5_long.png

Model 4 vs Contact (Top L/2)

./work/multicom-Q9KRJ6/full_length/casp4_contact/L2_long.png

Model 4 vs Contact (Top L)

./work/multicom-Q9KRJ6/full_length/casp4_contact/L_long.png

Model 4 vs Contact (Top 2L)

./work/multicom-Q9KRJ6/full_length/casp4_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	98.80
TopL/2	95.65
TopL	77.05
Top2L	48.79

( Alignment file )

Alignment	Number
N	759
Neff	126

Model comparsion

Model	TM-score
Model 1	0.8583
Model 2	0.0747
Model 3	0.0747
Model 5	0.0747
Average	0.27060

Radius Gyration

RG	RG/(2.0*L^0.4)
23.03	1.03487

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
	significant

Note: The model is built by ab initio method, no significant templates are found!

Predicted Top 5 Tertiary structure

Predicted Model 5

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d5"[x]

Model 5 vs Contact (Top L/5)

./work/multicom-Q9KRJ6/full_length/casp5_contact/L5_long.png

Model 5 vs Contact (Top L/2)

./work/multicom-Q9KRJ6/full_length/casp5_contact/L2_long.png

Model 5 vs Contact (Top L)

./work/multicom-Q9KRJ6/full_length/casp5_contact/L_long.png

Model 5 vs Contact (Top 2L)

./work/multicom-Q9KRJ6/full_length/casp5_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	0.00
TopL/2	0.00
TopL	0.00
Top2L	0.00

( Alignment file )

Alignment	Number
N	759
Neff	126

Model comparsion

Model	TM-score
Model 1	0.0761
Model 2	1.0000
Model 3	1.0000
Model 4	0.0747
Average	0.53770

Radius Gyration

RG	RG/(2.0*L^0.4)
245.41	11.02763

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
	significant

>Q9KRJ6 MSPIELWLYSLQQEKGSPMHKPLSIAVLLTVALVGCQSEETQSNTGLTAQAKADAVVAQKRQLAESFSQNYAAYAHTLKTQISADNLSISVSELVESAPNTEMSQQLRSADKNVRTLKGIDQFTEQLLQLRLADASMLKEWQEGQSPLFAFEPSGNDDSWQYIEAYDVYGQIHQLDVYQLPDVPVFVVDNDSAVELKAGLQAMRAEMQRLGQSPQLSTQESSSIEASTRSLSRSASADTAPISTTVLKKIRLQDDKEPWISGRAEIYALVTGVDPSRDKPTIDLIDMPYLDYDKQDYFPNQVVIHWTRYRWGAADMILMEQDDGTDYKELAKQLVKVAEEVLKLIPDPEVQGYAIIAQITGKIIEAIPDGVLVNDDDFVDVFYTLMQDTQYTDHPGANGNATATFEPLTIYPTK* >2PE4A|pos:81-109 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLIAHLARTFQDILAAIPAPDFSGLAVID---------------------------------------------------------*

( Image Alignment )

Domain Boundary prediction ( View )

Protein sequence

Secondary structure prediction (H: Helix E: Strand C: Coil)

Solvent accessibility prediction (e: Exposed b: Buried)

Disorder prediction (N: Normal T: Disorder)

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

References

Domain Boundary prediction ( View )

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

References

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )