Protein sequence

>Q9KRZ8: 1-564

1-60:

M

S

R

I

T

F

K

R

S

I

L

A

S

A

V

L

A

T

Q

T

A

N

A

L

Y

Q

V

M

E

V

T

P

S

T

G

Q

S

Y

G

S

A

W

G

V

A

I

Q

P

S

T

G

T

D

S

C

F

N

61-119:

S

T

V

G

S

V

N

C

Q

N

F

A

L

A

G

E

T

R

I

E

K

A

S

T

G

K

A

V

D

G

L

S

Y

R

D

E

V

A

F

G

I

D

N

A

F

V

Y

V

Q

E

R

N

D

F

E

R

Y

C

Y

N

121-179:

E

L

Y

S

T

C

N

T

W

A

D

P

H

W

N

R

W

Q

A

E

I

N

S

T

Q

V

A

N

S

I

A

F

I

G

T

G

T

G

A

P

I

D

E

S

Q

N

V

I

V

N

S

L

T

S

N

A

T

P

181-239:

I

G

I

N

V

K

T

G

D

V

T

Y

R

N

A

N

A

I

Q

A

R

S

T

V

A

P

N

I

T

D

A

L

Y

T

R

A

W

K

T

D

G

V

Y

T

V

G

S

I

S

R

S

N

E

G

A

241-299:

Y

F

Y

S

K

P

A

I

W

K

N

S

N

G

E

T

V

E

L

S

W

P

T

G

T

E

P

N

R

N

R

L

A

Q

G

S

M

R

D

V

E

N

G

K

L

Y

A

V

G

Y

S

Y

D

T

D

N

301-359:

H

Y

M

Q

A

S

V

F

E

L

D

N

T

S

N

F

S

N

A

S

W

T

K

A

V

S

G

A

E

S

R

I

G

D

Y

I

H

S

N

S

V

T

D

V

N

K

N

L

V

A

L

G

S

A

K

R

361-419:

A

G

S

R

P

E

N

G

A

G

N

R

L

F

V

I

E

D

V

S

A

S

T

P

T

A

N

F

L

T

G

I

F

T

G

A

G

K

A

G

A

I

N

S

Y

N

E

I

V

G

Q

V

D

A

N

D

421-479:

T

R

E

N

D

G

K

P

R

K

R

G

F

I

Y

P

Y

S

A

N

G

S

D

P

S

R

M

A

I

F

A

N

K

A

W

L

D

L

T

N

D

N

T

A

T

G

N

Q

F

R

I

D

A

T

481-539:

D

I

N

D

A

G

V

I

S

A

T

A

L

K

C

S

G

Y

D

T

A

H

N

S

L

C

S

N

R

E

T

V

A

V

K

L

V

P

I

V

N

A

T

S

A

N

I

Q

R

S

T

E

Q

A

541-564:

S

E

R

K

G

S

F

G

L

G

L

M

V

L

G

V

L

G

F

R

K

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60:

C

H

C

H

E

C

E

C

61-119:

C

E

C

E

H

C

H

121-179:

H

C

H

C

H

C

E

C

E

C

181-239:

C

E

C

E

C

E

C

E

C

E

C

241-299:

E

C

E

C

E

C

H

C

H

E

C

E

C

301-359:

C

E

C

E

C

E

C

E

C

H

361-419:

C

E

C

E

C

H

C

E

421-479:

C

E

C

H

C

E

H

C

E

C

481-539:

C

E

C

E

C

541-564:

C

H

C

H(Helix): 74(13.12%)

E(Strand): 140(24.82%)

C(Coil): 350(62.06%)

Solvent accessibility prediction (e: Exposed b: Buried)

1-60:

E

B

E

B

E

B

E

B

E

B

E

B

E

61-119:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

121-179:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

181-239:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

241-299:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

301-359:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

361-419:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

421-479:

E

B

E

B

E

B

E

B

E

B

E

B

E

481-539:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

541-564:

B

E

B

E

e(Exposed): 239(42.38%)

b(Buried): 325(57.62%)

Disorder prediction (N: Normal T: Disorder)

1-60:

T

N

61-119:

N

121-179:

N

181-239:

N

241-299:

N

301-359:

N

361-419:

N

421-479:

N

481-539:

N

T

N

T

N

T

N

541-564:

N

N(Normal): 554(98.23%)

T(Disorder): 10(1.77%)

Predicted contact map and distance map

Predicted distance map

Predicted contact map

Probability to Precision

Long-Range	Average probability	Predicted precision
TopL/5	0.84	83.75
TopL/2	0.62	65.54

Note: The linear model (Average probability vs Predicted precision) was trained on CASP14 dataset

Predicted Top 1 Tertiary structure

Predicted Model 1

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d1"[x]

Model 1 vs Contact (Top L/5)

./work/multicom-Q9KRZ8/full_length/casp1_contact/L5_long.png

Model 1 vs Contact (Top L/2)

./work/multicom-Q9KRZ8/full_length/casp1_contact/L2_long.png

Model 1 vs Contact (Top L)

./work/multicom-Q9KRZ8/full_length/casp1_contact/L_long.png

Model 1 vs Contact (Top 2L)

./work/multicom-Q9KRZ8/full_length/casp1_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	1.77
TopL/2	1.06
TopL	0.53
Top2L	0.27

( Alignment file )

Alignment	Number
N	892
Neff	120

Model comparsion

Model	TM-score
Model 2	0.1710
Model 3	0.7411
Model 4	0.7335
Model 5	0.1679
Average	0.45337

Radius Gyration

RG	RG/(2.0*L^0.4)
279.70	11.10348

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
	significant

>Q9KRZ8 MSRITFKRSILASAVLLATQTANAALYQVMEVTPSTGQ--SYGSAWGV-AIQPSTGTDSCFNNSTVGSVNCQNFALAGETRIEKASTGKAVDGLSYRDEVAFGID-NAFVYVQERNDFERYCYNELLYSTCNTWADPHWNRWQAEINSTQVANSIAFIGTGTTGAPIDESQNVIVNSLTSNATPIGINVKTGDVTTYRRNANAIQARSTVAPNITDALYTRAWKTDGVYTVGSISRSSNNNEGAYFYSKPAIWKNSNGETVELSWPTGTEPNRNNRLAQGSMRDVVENGGKLYAVGYSSYDTDNHYMQASVFELDNTSNFSNAASWTTKAVSGAESRIGGDYIHSNSVVTDVNKNLVALGSAKRAGSRPENGAAGNRLFVIEDVSASTPTANFLTGGIFFTGAGGKAGAINSYNEIVGQVDANDTRENDGKPRRKRGFIYPYSANGSDPSRMAIFANKAWLLDDLTNDNTATGNNNQFRIIDATDINDAGVISATALKCSGGYDTTAHNSLCSNREETVVAVKLVPIVNATSANIQQRSTEEQASERKGGSFGLGLLMVLGVLGFRRK* >2JNAA|pos:1-103 MKKRII-AAALLATV--ASFSTLAA----EQVSKQEISHFKL-VKVGTINVSQS---GGQISSP----SDL-REKLS--ELADAK-------GGKYYHIIAAREHGPNF-EA-V-AEVYN-DATKLEHHHHH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------* >2K9YA|pos:1-40 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFQTLSPEGSGNLAVI--------GGVAVGVVLLLVLAGVGFFIHRRR*

( Image Alignment )

Predicted Top 2 Tertiary structure

Predicted Model 2

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d2"[x]

Model 2 vs Contact (Top L/5)

Note: No long-range contacts in the model!

Model 2 vs Contact (Top L/2)

./work/multicom-Q9KRZ8/full_length/casp2_contact/L2_long.png

Model 2 vs Contact (Top L)

./work/multicom-Q9KRZ8/full_length/casp2_contact/L_long.png

Model 2 vs Contact (Top 2L)

./work/multicom-Q9KRZ8/full_length/casp2_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Alignment	Number
N	892
Neff	120

Model comparsion

Model	TM-score
Model 1	0.1710
Model 3	0.1675
Model 4	0.1682
Model 5	0.5029
Average	0.25240

Radius Gyration

RG	RG/(2.0*L^0.4)
364.85	14.48375

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
	significant

>Q9KRZ8 MSRITFKRSILASAVLLATQTANAALYQVMEVTPSTGQSYGSAWGVAIQPSTGTDSCFNNSTVGSVNCQNFALAGETRIEKASTGKAVDGLSYRDEVAFGIDNAFVYVQERNDFERYCYNELLYSTCNTWADPHWNRWQAEINSTQVANSIAFIGTGTTGAPIDESQNVIVNSLTSNATPIGINVKTGDVTTYRRNANAIQARSTVAPNITDALYTRAWKTDGVYTVGSISRSSNNNEGAYFYSKPAIWKNSNGETVELSWPTGTEPNRNNRLAQGSMRDVVENGGKLYAVGYSSYDTDNHYMQASVFELDNTSNFSNAASWTTKAVSGAESRIGGDYIHSNSVVTDVNKNLVALGSAKRAGSRPENGAAGNRLFVIEDVSASTPTANFLTGGIFFTGAGGKAGAINSYNEIVGQVDANDTRENDGKPRRKRGFIYPYSANGSDPSRMAIFANKAWLLDDLTNDNTATGNNNQFRIIDATDINDAGVISATALKCSGGYDTTAHNSLCSNREETVVAVKLVPIVNATSANIQQRSTEEQASERKGGSFGLGLLMVLGVLGFRRK* >2K1LA|pos:26-36 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLLGILVFRSR*

( Image Alignment )

Predicted Top 3 Tertiary structure

Predicted Model 3

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d3"[x]

Model 3 vs Contact (Top L/5)

./work/multicom-Q9KRZ8/full_length/casp3_contact/L5_long.png

Model 3 vs Contact (Top L/2)

./work/multicom-Q9KRZ8/full_length/casp3_contact/L2_long.png

Model 3 vs Contact (Top L)

./work/multicom-Q9KRZ8/full_length/casp3_contact/L_long.png

Model 3 vs Contact (Top 2L)

./work/multicom-Q9KRZ8/full_length/casp3_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	1.77
TopL/2	1.06
TopL	0.53
Top2L	0.27

( Alignment file )

Alignment	Number
N	892
Neff	120

Model comparsion

Model	TM-score
Model 1	0.7411
Model 2	0.1675
Model 4	0.9443
Model 5	0.1634
Average	0.50408

Radius Gyration

RG	RG/(2.0*L^0.4)
268.26	10.64934

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
	significant

>Q9KRZ8 MSRITFKRSILASAVLLATQTANAALYQVMEVTPSTGQ--SYGSAWGV-AIQPSTGTDSCFNNSTVGSVNCQNFALAGETRIEKASTGKAVDGLSYRDEVAFGID-NAFVYVQERNDFERYCYNELLYSTCNTWADPHWNRWQAEINSTQVANSIAFIGTGTTGAPIDESQNVIVNSLTSNATPIGINVKTGDVTTYRRNANAIQARSTVAPNITDALYTRAWKTDGVYTVGSISRSSNNNEGAYFYSKPAIWKNSNGETVELSWPTGTEPNRNNRLAQGSMRDVVENGGKLYAVGYSSYDTDNHYMQASVFELDNTSNFSNAASWTTKAVSGAESRIGGDYIHSNSVVTDVNKNLVALGSAKRAGSRPENGAAGNRLFVIEDVSASTPTANFLTGGIFFTGAGGKAGAINSYNEIVGQVDANDTRENDGKPRRKRGFIYPYSANGSDPSRMAIFANKAWLLDDLTNDNTATGNNNQFRIIDATDINDAGVISATALKCSGGYDTTAHNSLCSNREETVVAVKLVPIVNATSANIQQRSTEEQASERKGGSFGLGLLMVLGVLGFRRK* >2N2AA|pos:1-36 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEQ-RASPLTSII--------SAVVGILLVVVLGVVFGILIKRRQ* >2K1KA|pos:3-18 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVSRGLTGGEIVAVIF--------------------------------------------* >2JNAA|pos:1-103 MKKRII-AAALLATV--ASFSTLAA----EQVSKQEISHFKL-VKVGTINVSQS---GGQISSP----SDL-REKLS--ELADAK-------GGKYYHIIAAREHGPNF-EA-V-AEVYN-DATKLEHHHHH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------*

( Image Alignment )

Predicted Top 4 Tertiary structure

Predicted Model 4

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d4"[x]

Model 4 vs Contact (Top L/5)

./work/multicom-Q9KRZ8/full_length/casp4_contact/L5_long.png

Model 4 vs Contact (Top L/2)

./work/multicom-Q9KRZ8/full_length/casp4_contact/L2_long.png

Model 4 vs Contact (Top L)

./work/multicom-Q9KRZ8/full_length/casp4_contact/L_long.png

Model 4 vs Contact (Top 2L)

./work/multicom-Q9KRZ8/full_length/casp4_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	1.77
TopL/2	1.06
TopL	0.53
Top2L	0.27

( Alignment file )

Alignment	Number
N	892
Neff	120

Model comparsion

Model	TM-score
Model 1	0.7335
Model 2	0.1682
Model 3	0.9443
Model 5	0.1638
Average	0.50245

Radius Gyration

RG	RG/(2.0*L^0.4)
268.37	10.65370

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
	significant

>Q9KRZ8 MSRITFKRSILASAVLLATQTANAALYQVMEVTPSTGQ--SYGSAWGV-AIQPSTGTDSCFNNSTVGSVNCQNFALAGETRIEKASTGKAVDGLSYRDEVAFGID-NAFVYVQERNDFERYCYNELLYSTCNTWADPHWNRWQAEINSTQVANSIAFIGTGTTGAPIDESQNVIVNSLTSNATPIGINVKTGDVTTYRRNANAIQARSTVAPNITDALYTRAWKTDGVYTVGSISRSSNNNEGAYFYSKPAIWKNSNGETVELSWPTGTEPNRNNRLAQGSMRDVVENGGKLYAVGYSSYDTDNHYMQASVFELDNTSNFSNAASWTTKAVSGAESRIGGDYIHSNSVVTDVNKNLVALGSAKRAGSRPENGAAGNRLFVIEDVSASTPTANFLTGGIFFTGAGGKAGAINSYNEIVGQVDANDTRENDGKPRRKRGFIYPYSANGSDPSRMAIFANKAWLLDDLTNDNTATGNNNQFRIIDATDINDAGVISATALKCSGGYDTTAHNSLCSNREETVVAVKLVPIVNATSANIQQRSTEEQASERKGGSFGLGLLMVLGVLGFRRK* >1IIJA|pos:1-35 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EQRASP--VTFII--------ATVVGVLLFLILVVVVGILIKRRR* >2K1KA|pos:3-18 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVSRGLTGGEIVAVIF--------------------------------------------* >2JNAA|pos:1-103 MKKRII-AAALLATV--ASFSTLAA----EQVSKQEISHFKL-VKVGTINVSQS---GGQISSP----SDL-REKLS--ELADAK-------GGKYYHIIAAREHGPNF-EA-V-AEVYN-DATKLEHHHHH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------*

( Image Alignment )

Predicted Top 5 Tertiary structure

Predicted Model 5

Jmol._Canvas2D (Jmol) "jsmolApplet_M23d5"[x]

Model 5 vs Contact (Top L/5)

./work/multicom-Q9KRZ8/full_length/casp5_contact/L5_long.png

Model 5 vs Contact (Top L/2)

./work/multicom-Q9KRZ8/full_length/casp5_contact/L2_long.png

Model 5 vs Contact (Top L)

./work/multicom-Q9KRZ8/full_length/casp5_contact/L_long.png

Model 5 vs Contact (Top 2L)

./work/multicom-Q9KRZ8/full_length/casp5_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	2.65
TopL/2	1.77
TopL	1.24
Top2L	0.62

( Alignment file )

Alignment	Number
N	892
Neff	120

Model comparsion

Model	TM-score
Model 1	0.1679
Model 2	0.5029
Model 3	0.1634
Model 4	0.1638
Average	0.24950

Radius Gyration

RG	RG/(2.0*L^0.4)
354.54	14.07446

Note: Radius Gyration is calculated based on wiki

Similar pdbs

PDB	TM-score
	significant

>Q9KRZ8 MSRITFKRSILASAVLLATQTANAALYQVMEVTPSTGQSYGSAWGVAIQPSTGTDSCFNNSTVGSVNCQNFALAGETRIEKASTGKAVDGLSYRDEVAFGIDNAFVYVQERNDFERYCYNELLYSTCNTWADPHWNRWQAEINSTQVANSIAFIGTGTTGAPIDESQNVIVNSLTSNATPIGINVKTGDVTTYRRNANAIQARSTVAPNITDALYTRAWKTDGVYTVGSISRSSNNNEGAYFYSKPAIWKNSNGETVELSWPTGTEPNRNNRLAQGSMRDVVENGGKLYAVGYSSYDTDNHYMQASVFELDNTSNFSNAASWTTKAVSGAESRIGGDYIHSNSVVTDVNKNLVALGSAKRAGSRPENGAAGNRLFVIEDVSASTPTANFLTGGIFFTGAGGKAGAINSYNEIVGQVDANDTRENDGKPRRKRGFIYPYSANGSDPSRMAIFANKAWLLDDLTNDNTATGNNNQFRIIDATDINDAG-VISATALKCSG----GYDTTAHNSLCSNREETVVAVKLVPIVNATS---ANIQQRSTE-EQASERKGGSFGLGLLMVLGVLGFRRK* >4RHSA|pos:1-114 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EWTGDNTN----AYY--SDEVISELHVGQ---IDTSPYFCIKTVKANGSGTPVVACAVSKQSIWAPSFKELLDQARYFYSTGQSVRIHVQKNIWTYPLFVNTFSANALVGLSSCSA-TQCFGPK-------------*

( Image Alignment )

Domain Boundary prediction ( View )

Protein sequence

Secondary structure prediction (H: Helix E: Strand C: Coil)

Solvent accessibility prediction (e: Exposed b: Buried)

Disorder prediction (N: Normal T: Disorder)

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy
( Contact file )

( Alignment file )

Model comparsion

Radius Gyration

Similar pdbs

References

Domain Boundary prediction ( View )

Predicted contact map and distance map

Probability to Precision

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Model comparsion

Radius Gyration

Similar pdbs

References

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )