Protein sequence

>DpsqA:Drosophila psq (A isoform): 1-1046

1-60:

M

A

V

R

G

H

Q

Y

F

S

L

R

W

N

Y

Q

N

T

M

T

S

V

F

Q

L

R

E

D

L

S

F

V

D

V

T

L

S

C

E

H

G

S

L

K

A

H

K

V

L

S

A

C

S

T

Y

F

61-119:

Q

K

L

E

N

P

C

K

H

P

T

I

L

P

A

D

I

F

T

D

L

K

T

I

D

F

V

Y

R

G

E

I

D

V

T

E

S

E

L

Q

G

L

R

T

A

E

Q

L

K

I

K

G

L

C

121-179:

E

T

A

E

N

A

D

L

N

D

A

T

A

T

I

T

V

S

E

N

I

Q

A

V

G

N

I

V

N

A

I

V

P

G

A

P

S

P

S

L

E

Q

H

Q

A

181-239:

Q

E

Q

H

Q

V

H

A

Q

I

N

A

L

T

Q

H

G

V

S

G

S

V

S

L

S

G

Q

L

S

A

S

G

S

G

S

L

A

G

Q

A

241-299:

S

Q

T

P

S

G

L

Q

P

T

P

R

K

S

R

L

K

R

S

K

S

P

D

L

S

G

A

G

S

G

S

G

S

T

Q

P

Q

P

A

H

P

Q

T

I

L

I

Q

G

301-359:

Q

N

P

N

S

I

V

S

L

Q

T

A

D

G

N

Y

I

P

V

S

G

S

G

D

S

D

A

E

D

H

E

H

E

H

N

H

G

H

G

H

G

H

G

H

T

H

G

H

G

H

S

H

E

H

S

H

D

361-419:

H

E

H

E

H

K

P

N

K

I

C

K

T

E

H

S

V

A

S

P

A

S

N

S

A

S

N

A

G

V

S

G

V

T

S

T

G

Q

A

I

V

T

Q

I

V

A

R

D

G

K

D

T

K

N

M

421-479:

T

S

L

G

M

G

M

N

G

L

G

V

P

M

G

F

L

D

F

T

P

E

P

A

P

S

A

T

P

V

T

V

T

E

H

V

D

L

S

C

N

P

S

T

D

T

R

D

L

S

N

T

E

P

L

D

481-539:

I

D

N

H

L

A

Q

I

H

R

L

D

Q

S

P

M

H

S

I

S

H

T

G

D

E

S

N

S

N

L

V

Q

H

I

K

S

E

V

I

E

A

K

H

L

A

Q

H

A

L

S

Q

A

Q

541-599:

H

A

H

Q

A

H

Q

H

Q

H

Q

H

Q

H

L

H

A

Q

L

A

Q

S

Q

L

Q

H

Q

A

601-659:

A

G

V

H

G

Q

H

G

H

V

T

H

A

D

I

G

A

T

V

M

E

I

D

P

S

Q

I

K

H

E

P

G

M

I

T

P

E

I

V

N

M

S

G

H

M

D

M

Y

N

S

D

T

661-719:

S

E

D

S

M

I

A

N

G

S

P

H

D

Q

K

E

P

H

Y

T

N

L

D

Q

H

G

L

G

S

V

C

G

P

G

P

G

A

G

M

S

G

A

G

S

G

S

G

E

K

D

A

721-779:

L

K

N

Q

N

M

S

L

T

K

A

S

A

I

Y

G

I

P

S

T

L

W

Q

R

A

H

R

M

G

I

E

T

P

K

E

G

T

K

S

W

N

E

D

A

L

Q

N

A

L

E

A

L

R

S

G

Q

I

781-839:

S

A

N

K

A

S

K

A

F

G

I

P

S

T

L

Y

K

I

A

R

E

G

I

R

L

A

P

F

N

A

P

T

W

T

P

E

D

L

E

R

A

L

E

A

I

R

A

G

N

T

S

V

Q

K

A

841-899:

S

A

E

F

G

I

P

T

G

T

L

Y

G

R

C

K

R

E

G

I

E

L

S

R

S

N

P

T

P

W

S

E

D

A

M

N

E

A

L

N

S

V

R

V

G

Q

M

S

I

N

Q

A

I

H

Y

N

L

P

Y

901-959:

S

L

Y

G

R

F

K

R

G

K

Y

D

V

A

N

T

S

G

V

A

L

N

T

S

G

N

T

G

S

I

E

I

E

H

S

Q

E

N

S

L

H

M

L

Q

F

P

Y

S

P

S

P

H

P

961-1019:

P

T

P

Q

H

S

T

P

Q

H

S

A

Q

G

P

T

P

Q

H

M

Q

H

V

H

M

Q

S

P

H

P

G

H

P

Q

H

M

Q

D

V

T

S

1021-1046:

S

Q

V

H

S

Q

L

Q

I

Y

Q

H

G

T

P

E

R

S

Secondary structure prediction (H: Helix E: Strand C: Coil)

1-60:

C

E

C

H

C

E

C

E

H

C

H

61-119:

H

C

E

C

H

C

E

C

H

C

121-179:

C

181-239:

C

241-299:

C

H

C

301-359:

C

361-419:

C

E

C

H

421-479:

H

C

E

C

E

C

E

C

H

C

481-539:

C

H

C

H

C

H

C

H

C

H

541-599:

H

C

H

C

E

C

601-659:

C

E

C

E

C

E

H

C

661-719:

C

E

C

H

721-779:

H

C

H

C

H

C

H

C

781-839:

C

H

C

H

C

E

C

H

C

E

H

841-899:

H

C

E

C

E

C

H

C

H

C

901-959:

C

H

E

C

E

C

E

C

E

C

H

C

961-1019:

C

H

C

E

C

E

C

E

C

1021-1046:

C

E

C

H

C

Solvent accessibility prediction (e: Exposed b: Buried)

1-60:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

61-119:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

121-179:

E

B

E

181-239:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

241-299:

E

B

E

B

E

B

E

B

E

B

E

B

E

301-359:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

361-419:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

421-479:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

481-539:

B

E

B

E

B

E

B

E

B

E

B

E

541-599:

E

B

E

B

E

B

601-659:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

661-719:

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

721-779:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

781-839:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

841-899:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

901-959:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

961-1019:

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

B

E

1021-1046:

E

B

E

B

E

B

E

Disorder prediction (N: Normal T: Disorder)

1-60:

T

N

61-119:

N

121-179:

N

T

N

181-239:

N

T

241-299:

T

N

301-359:

N

T

361-419:

T

N

T

N

421-479:

N

T

N

T

N

T

N

T

N

481-539:

N

T

N

541-599:

N

601-659:

N

T

N

T

661-719:

T

N

721-779:

N

781-839:

N

841-899:

N

901-959:

N

T

961-1019:

T

N

T

N

1021-1046:

N

T

Predicted Top 1 Tertiary structure

Predicted Model 1

Model 1 vs Contact (Top L/5)

.//full_length/casp1_contact/L5_long.png

Model 1 vs Contact (Top L/2)

.//full_length/casp1_contact/L2_long.png

Model 1 vs Contact (Top L)

Model 1 vs Contact (Top 2L)

.//full_length/casp1_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	0.96
TopL/2	1.53
TopL	1.53
Top2L	1.43

Alignment	Number
N	0
Neff	0

Note: This is multi-domain structure, check alignments and domain qualities in individual domains!

Predicted Top 2 Tertiary structure

Predicted Model 2

Model 2 vs Contact (Top L/5)

.//full_length/casp2_contact/L5_long.png

Model 2 vs Contact (Top L/2)

.//full_length/casp2_contact/L2_long.png

Model 2 vs Contact (Top L)

Model 2 vs Contact (Top 2L)

.//full_length/casp2_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	0.96
TopL/2	1.53
TopL	1.43
Top2L	1.34

Alignment	Number
N	0
Neff	0

Note: This is multi-domain structure, check alignments and domain qualities in individual domains!

Predicted Top 3 Tertiary structure

Predicted Model 3

Model 3 vs Contact (Top L/5)

.//full_length/casp3_contact/L5_long.png

Model 3 vs Contact (Top L/2)

.//full_length/casp3_contact/L2_long.png

Model 3 vs Contact (Top L)

Model 3 vs Contact (Top 2L)

.//full_length/casp3_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	1.91
TopL/2	2.68
TopL	2.20
Top2L	1.91

Alignment	Number
N	0
Neff	0

Note: This is multi-domain structure, check alignments and domain qualities in individual domains!

Predicted Top 4 Tertiary structure

Predicted Model 4

Model 4 vs Contact (Top L/5)

.//full_length/casp4_contact/L5_long.png

Model 4 vs Contact (Top L/2)

.//full_length/casp4_contact/L2_long.png

Model 4 vs Contact (Top L)

Model 4 vs Contact (Top 2L)

.//full_length/casp4_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	0.96
TopL/2	1.15
TopL	1.05
Top2L	1.10

Alignment	Number
N	0
Neff	0

Note: This is multi-domain structure, check alignments and domain qualities in individual domains!

Predicted Top 5 Tertiary structure

Predicted Model 5

Model 5 vs Contact (Top L/5)

.//full_length/casp5_contact/L5_long.png

Model 5 vs Contact (Top L/2)

.//full_length/casp5_contact/L2_long.png

Model 5 vs Contact (Top L)

Model 5 vs Contact (Top 2L)

.//full_length/casp5_contact/2L_long.png

Predicted Contact Accuracy
( Contact file )

Long-Range	Precision
TopL/5	0.96
TopL/2	1.72
TopL	1.91
Top2L	2.01

Alignment	Number
N	0
Neff	0

Note: This is multi-domain structure, check alignments and domain qualities in individual domains!

External Links

Domain Boundary prediction ( View )

Protein sequence

Secondary structure prediction (H: Helix E: Strand C: Coil)

Solvent accessibility prediction (e: Exposed b: Buried)

Disorder prediction (N: Normal T: Disorder)

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy
( Contact file )

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy
( Contact file )

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy
( Contact file )

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy
( Contact file )

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy
( Contact file )

References

External Links

Domain Boundary prediction ( View )

Protein sequence

Secondary structure prediction (H: Helix E: Strand C: Coil)

Solvent accessibility prediction (e: Exposed b: Buried)

Disorder prediction (N: Normal T: Disorder)

Predicted Top 1 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Predicted Top 2 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Predicted Top 3 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Predicted Top 4 Tertiary structure

Predicted Contact Accuracy ( Contact file )

Predicted Top 5 Tertiary structure

Predicted Contact Accuracy ( Contact file )

References

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )

Predicted Contact Accuracy
( Contact file )